RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMIM28-201ENST00000573100 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
SMIM28-201ENST00000573100 GMIPQ9P107 970 aa12.99□□□□□ -0.33
SMIM28-201ENST00000573100 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
SMIM28-201ENST00000573100 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
SMIM28-201ENST00000573100 ATP8B3O60423 1300 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 TNFSF14O43557 240 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 GREM1O60565 184 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 TLR5O60602 858 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 ABCG1P45844 678 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 TPMTP51580 245 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 ZNF132P52740 706 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 SLC5A3P53794 718 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 TMPRSS6Q8IU80 811 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 SIPA1Q96FS4 1042 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 MED10Q9BTT4 135 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 NUP58Q9BVL2 599 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 FGFBP2Q9BYJ0 223 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 MKRN2Q9H000 416 aaKnown RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 KIAA1586Q9HCI6 787 aa12.98□□□□□ -0.33
SMIM28-201ENST00000573100 DMAP1Q9NPF5 467 aaPredicted RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 EIF2B4Q9UI10 523 aaKnown RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMIM28-201ENST00000573100 A0A1B0GVT2 93 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 KCNJ18B7U540 433 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 NPC1O15118 1278 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 TBX18O95935 607 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 TNNI1P19237 187 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 GJB2P29033 226 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 PGFP49763 221 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 SMAD1Q15797 465 aaKnown RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 CCDC157Q569K6 752 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 C1orf216Q8TAB5 229 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 PIP4K2CQ8TBX8 421 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 BHMTQ93088 406 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
SMIM28-201ENST00000573100 BTBD3Q9Y2F9 522 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 SHROOM3Q8TF72 1996 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 TENM4Q6N022 2769 aa12.97□□□□□ -0.33
SMIM28-201ENST00000573100 PTPRQQ9UMZ3 2332 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 FRMD3A2A2Y4 597 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 E9PAM4 449 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 ACADMP11310 421 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 ATP5C1P36542 298 aaKnown RBP12.96□□□□□ -0.33
SMIM28-201ENST00000573100 AFF3P51826 1226 aaKnown RBP12.96□□□□□ -0.33
SMIM28-201ENST00000573100 TRPC3Q13507 836 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 PTPRNQ16849 979 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 KIF19Q2TAC6 998 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 PAQR9Q6ZVX9 377 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 FAM35AQ86V20 835 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.33
SMIM28-201ENST00000573100 PLK2Q9NYY3 685 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 THAP10Q9P2Z0 257 aaPredicted RBP12.96□□□□□ -0.33
SMIM28-201ENST00000573100 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
SMIM28-201ENST00000573100 ATXN7O15265 892 aaPredicted RBP12.95□□□□□ -0.34
SMIM28-201ENST00000573100 AP1G2O75843 785 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 C1QL1O75973 258 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
SMIM28-201ENST00000573100 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 HLA-EP13747 358 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 ACO1P21399 889 aaKnown RBP12.95□□□□□ -0.34
SMIM28-201ENST00000573100 TXLNAP40222 546 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 IL12RB1P42701 662 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 GRK6P43250 576 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 MYL6P60660 151 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 TEAD4Q15561 434 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
SMIM28-201ENST00000573100 DHRS13Q6UX07 377 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 BRAPQ7Z569 592 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 ZNF605Q86T29 641 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 LSM14AQ8ND56 463 aaKnown RBP12.95□□□□□ -0.34
SMIM28-201ENST00000573100 TNIP3Q96KP6 325 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 PCED1AQ9H1Q7 454 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
SMIM28-201ENST00000573100 ITPKBP27987 946 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms