RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 AP1G2O75843 785 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 EGFP01133 1207 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 UCHL3P15374 230 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 CDC25CP30307 473 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 AVPR1AP37288 418 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 CYP4F8P98187 520 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 IFRD2Q12894 506 aaPredicted RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 FBXO43Q4G163 708 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 USP39Q53GS9 565 aaKnown RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 PPP1R26Q5T8A7 1209 aaPredicted RBP14.04□□□□□ -0.16
CCDC40-205ENST00000571028 DPY19L2P1Q6NXN4 242 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 ENOSF1Q7L5Y1 443 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 FUKQ8N0W3 1084 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 RPLP0P6Q8NHW5 317 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 COL26A1Q96A83 441 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 GANQ9H2C0 597 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 EBF3Q9H4W6 596 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 ACP6Q9NPH0 428 aa14.04□□□□□ -0.16
CCDC40-205ENST00000571028 F8VP50 259 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 CYP26A1O43174 497 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 NOL4O94818 638 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 ATF6P18850 670 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 WEE1P30291 646 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 MAP3K7CLP57077 242 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 LMAN2Q12907 356 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 DMC1Q14565 340 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 NR1I3Q14994 352 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 CFAP221Q4G0U5 840 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 SGO2Q562F6 1265 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 SYT13Q7L8C5 426 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 TSTD1Q8NFU3 115 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 UBA3Q8TBC4 463 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 TFAP2BQ92481 460 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCDC40-205ENST00000571028 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 SPAG5Q96R06 1193 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 KCNK16Q96T55 309 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 P2RY13Q9BPV8 354 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 XPO4Q9C0E2 1151 aaKnown RBP14.03□□□□□ -0.16
CCDC40-205ENST00000571028 SMG9Q9H0W8 520 aaKnown RBP14.03□□□□□ -0.16
CCDC40-205ENST00000571028 ABCB6Q9NP58 842 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 PLCB1Q9NQ66 1216 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-205ENST00000571028 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 ZMYM5Q9UJ78 669 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 INVSQ9Y283 1065 aa14.03□□□□□ -0.16
CCDC40-205ENST00000571028 FAM170AA1A519 330 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 THAP12O43422 761 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 BEST1O76090 585 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 PAEPP09466 180 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 FAM200BP0CF97 657 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 VDRP11473 427 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 MAGEA11P43364 429 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 DHPSP49366 369 aaPredicted RBP14.02□□□□□ -0.17
CCDC40-205ENST00000571028 PMS2CLQ68D20 193 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 TRIM68Q6AZZ1 485 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 SHC3Q92529 594 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 SMARCD1Q96GM5 515 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 HNRNPABQ99729 332 aaKnown RBP14.02□□□□□ -0.17
CCDC40-205ENST00000571028 SMOQ99835 787 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 NUSAP1Q9BXS6 441 aaKnown RBP14.02□□□□□ -0.17
CCDC40-205ENST00000571028 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 HESX1Q9UBX0 185 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 MSRB2Q9Y3D2 182 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 SDK1Q7Z5N4 2213 aa14.02□□□□□ -0.17
CCDC40-205ENST00000571028 EIF4E1BA6NMX2 242 aaKnown RBP14.01□□□□□ -0.17
CCDC40-205ENST00000571028 PATE3B3GLJ2 98 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TAF4O00268 1085 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TRIM66O15016 1216 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 CBFA2T2O43439 604 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 GFPT2O94808 682 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 GNA15P30679 374 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 MAPK8P45983 427 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 SIM1P81133 766 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-205ENST00000571028 ARID5AQ03989 594 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 VSTM1Q6UX27 236 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 CMTM8Q8IZV2 173 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 CPA6Q8N4T0 437 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 PIGKQ92643 395 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 FAM83CQ9BQN1 747 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
CCDC40-205ENST00000571028 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TPSD1Q9BZJ3 242 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TRIM5Q9C035 493 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 FAM124BQ9H5Z6 455 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-205ENST00000571028 KIF9Q9HAQ2 790 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 DMAP1Q9NPF5 467 aaPredicted RBP14.01□□□□□ -0.17
CCDC40-205ENST00000571028 HPS4Q9NQG7 708 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 HSFX1Q9UBD0 423 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 KLK13Q9UKR3 277 aa14.01□□□□□ -0.17
CCDC40-205ENST00000571028 TSPAN16Q9UKR8 245 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms