RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 NUSAP1Q9BXS6 441 aaKnown RBP9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 FBXO44Q9H4M3 255 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 CSNK1G1Q9HCP0 422 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 COMMD8Q9NX08 183 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 CACNA2D2Q9NY47 1150 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 CYP8B1Q9UNU6 501 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 SCML2Q9UQR0 700 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 CHD6Q8TD26 2715 aa9.08□□□□□ -0.96
CTDNEP1-203ENST00000570385 SPAARA0A1B0GVQ0 90 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 IKBKBO14920 756 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 CALUO43852 315 aaPredicted RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 HMBSP08397 361 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 NDUFV2P19404 249 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 NR2F2P24468 414 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 NDUFA8P51970 172 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 ATXN3P54252 364 aaPredicted RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 LMAN2Q12907 356 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 BYSLQ13895 437 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 SDE2Q6IQ49 451 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 KIAA1324Q6UXG2 1013 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 SCD5Q86SK9 330 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 IPO4Q8TEX9 1081 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 TAF4BQ92750 862 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 NT5C1AQ9BXI3 368 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 IMPG2Q9BZV3 1241 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 WDR35Q9P2L0 1181 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 EVLQ9UI08 416 aaPredicted RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 RASAL2Q9UJF2 1139 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 LSM7Q9UK45 103 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 PILRBQ9UKJ0 227 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 LAMA1P25391 3075 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 CEP192Q8TEP8 1941 aa9.07□□□□□ -0.96
CTDNEP1-203ENST00000570385 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 IGHV1OR15-9A0A0B4J2B8 117 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 AP5Z1O43299 807 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 HYAL3O43820 417 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CACNG3O60359 315 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CILPO75339 1184 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 STC2O76061 302 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 KLKB1P03952 638 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 PROS1P07225 676 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CISD3P0C7P0 127 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 KRT13P13646 458 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CEACAM1P13688 526 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 TRIM21P19474 475 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CSRP1P21291 193 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CMA1P23946 247 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 MAOBP27338 520 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SYKP43405 635 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 PLA2G4AP47712 749 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 DGKGP49619 791 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 GFPT1Q06210 699 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 ZNF33AQ06730 810 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 GOLGA8FQ08AF8 430 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 GOLGA8DPQ0D2H9 430 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 INCA1Q0VD86 236 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 EFEMP1Q12805 493 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 PREPLQ4J6C6 727 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 PPP1R26Q5T8A7 1209 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 ATL3Q6DD88 541 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC23A3Q6PIS1 610 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 UNQ6494/PRO21346Q6UXR6 183 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 TRMT11Q7Z4G4 463 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CACUL1Q86Y37 369 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC41A1Q8IVJ1 513 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 FAM186BQ8IYM0 893 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 RGL4Q8IZJ4 473 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 TRIML1Q8N9V2 468 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 NDRG1Q92597 394 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SEMA4DQ92854 862 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 HEXIM2Q96MH2 286 aaKnown RBP9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 HSPA12BQ96MM6 686 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SCNM1Q9BWG6 230 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 NIF3L1Q9GZT8 377 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CYP3A43Q9HB55 503 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 DNMT3LQ9UJW3 386 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 SLC6A14Q9UN76 642 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 TRAF3IP3Q9Y228 551 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 HPSEQ9Y251 543 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 STARD13Q9Y3M8 1113 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
CTDNEP1-203ENST00000570385 TNRC6BQ9UPQ9 1833 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 FRYQ5TBA9 3013 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 NDUFS2O75306 463 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 RALAP11233 206 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 KIF11P52732 1056 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 FAM193AP78312 1265 aa9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 SIM1P81133 766 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-203ENST00000570385 DPYDQ12882 1025 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms