RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SDK1Q7Z5N4 2213 aa17.96■□□□□ 0.47
MAP1LC3B-208ENST00000570189 GADD45BO75293 160 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 STC2O76061 302 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ZNF806P0C7X5 589 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 GCNT1Q02742 428 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 BST2Q10589 180 aaKnown RBP17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CETN1Q12798 172 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 EOGTQ5NDL2 527 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PLA2G2CQ5R387 149 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SMYD5Q6GMV2 418 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 DGLUCYQ7Z3D6 616 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TRMT11Q7Z4G4 463 aaKnown RBP17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TRIM59Q8IWR1 403 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 OLIG1Q8TAK6 271 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 NELFBQ8WX92 580 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KCTD13Q8WZ19 329 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 DCLK3Q9C098 648 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 DUSP15Q9H1R2 295 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 FBXO10Q9UK96 956 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TSPAN16Q9UKR8 245 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ABCA7Q8IZY2 2146 aa17.95■□□□□ 0.46
MAP1LC3B-208ENST00000570189 LAMA1P25391 3075 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 O00370 1275 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ZBED1O96006 694 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SETSIPP0DME0 302 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 IRF1P10914 325 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 LIMK1P53667 647 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SEC13P55735 322 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PAK1Q13153 545 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 STILQ15468 1287 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CCDC40Q4G0X9 1142 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 LCLAT1Q6UWP7 414 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TMEM92Q6UXU6 159 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 BHLHA9Q7RTU4 235 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SFTPA1Q8IWL2 248 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ALLCQ8N6M5 410 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TXNDC5Q8NBS9 432 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 NT5C1BQ96P26 610 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 XPO6Q96QU8 1125 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 HESX1Q9UBX0 185 aa17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CDV3Q9UKY7 258 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SGK1O00141 431 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SLC30A4O14863 429 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ADAM23O75077 832 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ALDH1A2O94788 518 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 RHOBTB1O94844 696 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TYRP14679 529 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CHKAP35790 457 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TKTL1P51854 596 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ATXN1P54253 815 aaKnown RBP17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 UBE2HP62256 183 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KDSRQ06136 332 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PDE4CQ08493 712 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 GOLGA7BQ2TAP0 167 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ANO4Q32M45 955 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 USP39Q53GS9 565 aaKnown RBP17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ISM2Q6H9L7 571 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 FAM217AQ8IXS0 508 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 MDGA1Q8NFP4 955 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 POLMQ9NP87 494 aaPredicted RBP17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 OLA1Q9NTK5 396 aaKnown RBP17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CEP192Q8TEP8 1941 aa17.93■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TBC1D3BA6NDS4 549 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ANTXRLA6NF34 631 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 MDM4O15151 490 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KLF8O95600 359 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PENKP01210 267 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KLKB1P03952 638 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 HNRNPLP14866 589 aaKnown RBP eCLIP17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TIE1P35590 1138 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ZNF132P52740 706 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 YWHAGP61981 247 aaKnown RBP eCLIP17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ELF2Q15723 593 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PMS2CLQ68D20 193 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 GRAMD4Q6IC98 578 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KLHL10Q6JEL2 608 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CPXM2Q8N436 756 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CCDC33Q8N5R6 958 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 BBS2Q9BXC9 721 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CNGB3Q9NQW8 809 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 NUDT5Q9UKK9 219 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 HCN2Q9UL51 889 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CNTN6Q9UQ52 1028 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CTNND2Q9UQB3 1225 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SLC27A6Q9Y2P4 619 aa17.92■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TULP2O00295 520 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 FGFR1OPO95684 399 aaKnown RBP17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CISD3P0C7P0 127 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 KCNH2Q12809 1159 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 CNGA2Q16280 664 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 MEA1Q16626 185 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SPDYCQ5MJ68 293 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 EMC10Q5UCC4 262 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 TMEM270Q6UE05 265 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 MIB1Q86YT6 1006 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 NAT16Q8N8M0 369 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 SLC35F5Q8WV83 523 aa17.91■□□□□ 0.46
MAP1LC3B-208ENST00000570189 PLD4Q96BZ4 506 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms