RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 STAU1O95793 577 aaKnown RBP12.75□□□□□ -0.37
CAPN3-220ENST00000569827 EHHADHQ08426 723 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 MYLKQ15746 1914 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 PLEKHG6Q3KR16 790 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 SNX30Q5VWJ9 437 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 C19orf48Q6RUI8 117 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 UNC13DQ70J99 1090 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
CAPN3-220ENST00000569827 KIAA1958Q8N8K9 716 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 OTUB2Q96DC9 234 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 TWNKQ96RR1 684 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 MSRB2Q9Y3D2 182 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
CAPN3-220ENST00000569827 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 FAM92AA1XBS5 289 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 CACNG3O60359 315 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 NDUFS2O75306 463 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CAPN3-220ENST00000569827 HMBSP08397 361 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 ATICP31939 592 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 TUBP50607 506 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 SLC36A4Q6YBV0 504 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 MARCH9Q86YJ5 346 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
CAPN3-220ENST00000569827 PARD3BQ8TEW8 1205 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 MRGPRX1Q96LB2 322 aa12.74□□□□□ -0.37
CAPN3-220ENST00000569827 KCNJ18B7U540 433 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 HHLA1C9JL84 531 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 ACO1P21399 889 aaKnown RBP12.73□□□□□ -0.37
CAPN3-220ENST00000569827 ASPAP45381 313 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 DGKGP49619 791 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 AMPD3Q01432 767 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 GRIK2Q13002 908 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 KNOP1Q1ED39 458 aaKnown RBP12.73□□□□□ -0.37
CAPN3-220ENST00000569827 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 CLEC20AQ6ZU45 233 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 HTR3DQ70Z44 454 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 IQUBQ8NA54 791 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 CEP76Q8TAP6 659 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 XPO6Q96QU8 1125 aaKnown RBP12.73□□□□□ -0.37
CAPN3-220ENST00000569827 GABRG3Q99928 467 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 LRRC27Q9C0I9 530 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 MIR1-1HGQ9H1L0 117 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 TLR8Q9NR97 1041 aaKnown RBP12.73□□□□□ -0.37
CAPN3-220ENST00000569827 STARD13Q9Y3M8 1113 aa12.73□□□□□ -0.37
CAPN3-220ENST00000569827 MORC2Q9Y6X9 1032 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-220ENST00000569827 GCN1Q92616 2671 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 KNTC1P50748 2209 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 MEI4A8MW99 385 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 CUTAO60888 179 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 PPP6R2O75170 966 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 GJB3O75712 270 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 KIF20AO95235 890 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 FAM163BP0C2L3 166 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 RARGP13631 454 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 HOXD12P35452 270 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 ATP5C1P36542 298 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 PIK3CAP42336 1068 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 DPP6P42658 865 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 SCAPQ12770 1279 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 STK4Q13043 487 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 FUT11Q495W5 492 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 C10orf120Q5SQS8 335 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 SDE2Q6IQ49 451 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 CNNM4Q6P4Q7 775 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 RAB44Q7Z6P3 723 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 NAXDQ8IW45 347 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 GPR174Q9BXC1 333 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 MKRN2Q9H000 416 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 DNAAF2Q9NVR5 837 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
CAPN3-220ENST00000569827 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 SLCO1B1Q9Y6L6 691 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 STON1Q9Y6Q2 735 aa12.72□□□□□ -0.37
CAPN3-220ENST00000569827 A0A1W2PQD8 194 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 UPK3BL1B0FP48 263 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 UPK3BL2E5RIL1 263 aa12.71□□□□□ -0.37
CAPN3-220ENST00000569827 ZBTB24O43167 697 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-220ENST00000569827 KLRC4O43908 158 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms