RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 CCDC89Q8N998 374 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 PIK3R5Q8WYR1 880 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 PGAP3Q96FM1 320 aaPredicted RBP23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 MAK16Q9BXY0 300 aaKnown RBP23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 PIGVQ9NUD9 493 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 RRN3Q9NYV6 651 aa23.46■■□□□ 1.35
VCPKMT-205ENST00000569518 GOLGA6BA6NDN3 693 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 TBC1D4O60343 1298 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 PPFIA2O75334 1257 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 KRT14P02533 472 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 ATF2P15336 505 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 ITIH2P19823 946 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 ITGB8P26012 769 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 UAP1Q16222 522 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 RHBDF2Q6PJF5 856 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 BEND5Q7L4P6 421 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 CEP57Q86XR8 500 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 PLD5Q8N7P1 536 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 GLIS1Q8NBF1 620 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 SCAMP5Q8TAC9 235 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 KCTD15Q96SI1 283 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 DHX35Q9H5Z1 703 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 ABI2Q9NYB9 513 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 NT5C1B-RDH14C9J2C7 533 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 CAPN9O14815 690 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 NCAM1P13591 858 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 GRIK1P39086 918 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 LBX1P52954 281 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 SLC5A3P53794 718 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 CALCOCO2Q13137 446 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 NOMO1Q15155 1222 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 PPP6R3Q5H9R7 873 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 VSTM1Q6UX27 236 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 GSTA5Q7RTV2 222 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 SLC9A7Q96T83 725 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 TMEM121Q9BTD3 319 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 MAGEB5Q9BZ81 275 aa23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 WDR6Q9NNW5 1121 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-205ENST00000569518 TRIM43BA6NCK2 446 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 UPP2O95045 317 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 TIMP1P01033 207 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 HSD17B3P37058 310 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 MAGEA11P43364 429 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 DEUP1Q05D60 604 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 DHX9Q08211 1270 aaKnown RBP23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 GPS2Q13227 327 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 RTP2Q5QGT7 225 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 BSPRYQ5W0U4 402 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 PRUNE1Q86TP1 453 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 SLC7A14Q8TBB6 771 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 CCHCR1Q8TD31 782 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 TRIM43Q96BQ3 446 aaPredicted RBP23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 CWH43Q9H720 699 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 PLXNA3P51805 1871 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 MYO16Q9Y6X6 1858 aa23.44■■□□□ 1.34
VCPKMT-205ENST00000569518 ABHD14A-ACY1A0A1B0GW23 586 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 KIAA0355O15063 1070 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 TGM2P21980 687 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 GGCXP38435 758 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 ADCY8P40145 1251 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 NPNTQ6UXI9 565 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 C8orf48Q96LL4 319 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 MED4Q9NPJ6 270 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 MTRF1LQ9UGC7 380 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 PCDHB5Q9Y5E4 795 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 APOL1O14791 398 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 SYF2O95926 243 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 EIF3EP60228 445 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 NME3Q13232 169 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 RSPO2Q6UXX9 243 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 TAS1R1Q7RTX1 841 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 EDEM1Q92611 657 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 TOP1MTQ969P6 601 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 NTAN1Q96AB6 310 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 ZBTB9Q96C00 473 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 CSPG4P5Q96PW8 444 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 TRIM62Q9BVG3 475 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 PCDH9Q9HC56 1237 aa23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 RCOR3Q9P2K3 495 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-205ENST00000569518 MCF2LO15068 1137 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 OAS2P29728 719 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 VPS41P49754 854 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 AIF1P55008 147 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 SCAPQ12770 1279 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 SPDYCQ5MJ68 293 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 CFAP58Q5T655 872 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 RNF168Q8IYW5 571 aaPredicted RBP23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 PYROXD2Q8N2H3 581 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 ADAM32Q8TC27 787 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 P3H4Q92791 437 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 ZIM3Q96PE6 472 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 TTPALQ9BTX7 342 aa23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 RC3H2Q9HBD1 1191 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 CWC15Q9P013 229 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-205ENST00000569518 SYNJ2BP-COX16A0A087WUM0 186 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 TRIM66O15016 1216 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 ITGA8P53708 1063 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 CBX1P83916 185 aa23.41■■□□□ 1.34
VCPKMT-205ENST00000569518 CAV1Q03135 178 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms