RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 ANKRD40Q6AI12 368 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 OR4N4Q8N0Y3 316 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 C8orf49Q96NF6 230 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 ANKFY1Q9P2R3 1169 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 STEAP1Q9UHE8 339 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 TCAF1Q9Y4C2 921 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 ADGRA2Q96PE1 1338 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 AGAP5A6NIR3 686 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 AP4M1O00189 453 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 TMEM225BP0DP42 221 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 ITPKBP27987 946 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 RBM5P52756 815 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBR1-208ENST00000569066 CHRNDQ07001 517 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 TRPC3Q13507 836 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 EFR3AQ14156 821 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 PRKD1Q15139 912 aaPredicted RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 USP39Q53GS9 565 aaKnown RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 HS1BP3Q53T59 392 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 MAP3K21Q5TCX8 1036 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 KIAA1324Q6UXG2 1013 aaKnown RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 TBC1D1Q86TI0 1168 aaPredicted RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 P3H2Q8IVL5 708 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 C1orf210Q8IVY1 113 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 LINS1Q8NG48 757 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 NPIPB3Q92617 1050 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 FKBP10Q96AY3 582 aa6.52□□□□□ -1.37
UBR1-208ENST00000569066 TRPC5Q9UL62 973 aaPredicted RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 RRP7AQ9Y3A4 280 aaKnown RBP6.52□□□□□ -1.37
UBR1-208ENST00000569066 CENPVL1A0A0U1RR11 272 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 ITGAMP11215 1152 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 XBP1P17861 261 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 DDIT3P35638 169 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 SELENOPP49908 381 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 SLC9C2Q5TAH2 1124 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 DTX2Q86UW9 622 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 TTC30AQ86WT1 665 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 AGXT2Q9BYV1 514 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 GPR63Q9BZJ6 419 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 IFIT1P09914 478 aaKnown RBP6.51□□□□□ -1.37
UBR1-208ENST00000569066 CPA1P15085 419 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 CAPN3P20807 821 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 GSTM5P46439 218 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 RXRGP48443 463 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 TLE2Q04725 743 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 CCDC144NLQ6NUI1 221 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 ANKS1BQ7Z6G8 1248 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 STAMQ92783 540 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 CTHRC1Q96CG8 243 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 HVCN1Q96D96 273 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 ALG13Q9NP73 1137 aaKnown RBP6.51□□□□□ -1.37
UBR1-208ENST00000569066 ZBTB1Q9Y2K1 713 aa6.51□□□□□ -1.37
UBR1-208ENST00000569066 CSF1P09603 554 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 C1SP09871 688 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 E2F1Q01094 437 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 MAPK7Q13164 816 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 TDGQ13569 410 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 SPDYAQ5MJ70 313 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 PCYOX1LQ8NBM8 494 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 SLC25A43Q8WUT9 341 aaPredicted RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 EIF3CQ99613 913 aaKnown RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 DPCDQ9BVM2 203 aaPredicted RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 SAP30LQ9HAJ7 183 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 TLR8Q9NR97 1041 aaKnown RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 LIN7CQ9NUP9 197 aaKnown RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 NDUFAF4Q9P032 175 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 NKX1-2Q9UD57 310 aaPredicted RBP6.5□□□□□ -1.37
UBR1-208ENST00000569066 VPS4AQ9UN37 437 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 DERAQ9Y315 318 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 CCDC187A0A096LP49 1063 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 LAG3P18627 525 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 PCSK6P29122 969 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 CTGFP29279 349 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 CLCA4Q14CN2 919 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 ATG16L1Q676U5 607 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 LRRC71Q8N4P6 559 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 CLEC4CQ8WTT0 213 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 TFAP2BQ92481 460 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 RFKQ969G6 155 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 REEP2Q9BRK0 252 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 ARHGAP26Q9UNA1 814 aa6.5□□□□□ -1.37
UBR1-208ENST00000569066 YY2O15391 372 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 KRT9P35527 623 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 GUCY1B3Q02153 619 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 ITIH3Q06033 890 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 VWA1Q6PCB0 445 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 NME8Q8N427 588 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 ZUFSPQ96AP4 578 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 MYEOVQ96EZ4 313 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 RBM17Q96I25 401 aaKnown RBP6.49□□□□□ -1.37
UBR1-208ENST00000569066 REXO5Q96IC2 774 aaKnown RBP6.49□□□□□ -1.37
UBR1-208ENST00000569066 MLST8Q9BVC4 326 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 OSBPL5Q9H0X9 879 aaPredicted RBP6.49□□□□□ -1.37
UBR1-208ENST00000569066 IL21RQ9HBE5 538 aa6.49□□□□□ -1.37
UBR1-208ENST00000569066 SLC13A4Q9UKG4 626 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms