RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 GAD2Q05329 585 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 IQCB1Q15051 598 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 KRT31Q15323 416 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 MAN2A1Q16706 1144 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 PPP1R26Q5T8A7 1209 aaPredicted RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 SFTPA1Q8IWL2 248 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 ARID3AQ99856 593 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 FAM124BQ9H5Z6 455 aaPredicted RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 CISHQ9NSE2 258 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 OSER1Q9NX31 292 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 LSM7Q9UK45 103 aaKnown RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 THADAQ6YHU6 1953 aa13.56□□□□□ -0.24
TSC2-220ENST00000568238 CNOT1A5YKK6 2376 aaKnown RBP13.56□□□□□ -0.24
TSC2-220ENST00000568238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 MED19A0JLT2 244 aaPredicted RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 CAVIN2O95810 425 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 RARGP13631 454 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ATP1A3P13637 1013 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ZNF18P17022 549 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 PSEN1P49768 467 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 DGKEP52429 567 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 KIF11P52732 1056 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ATXN1P54253 815 aaKnown RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 ZNF445P59923 1031 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 MESP2Q0VG99 397 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 CETN1Q12798 172 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 LRMPQ12912 555 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ELF2Q15723 593 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ANO4Q32M45 955 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 PREPLQ4J6C6 727 aaPredicted RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ANO7Q6IWH7 933 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 CCDC186Q7Z3E2 898 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ETFBKMTQ8IXQ9 262 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ALLCQ8N6M5 410 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 WBP2Q969T9 261 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ZC3H10Q96K80 434 aaKnown RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 HEXIM2Q96MH2 286 aaKnown RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 RTKNQ9BST9 563 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 KLF16Q9BXK1 252 aaPredicted RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 INTS2Q9H0H0 1204 aaKnown RBP13.55□□□□□ -0.24
TSC2-220ENST00000568238 ARRDC1-AS1Q9H2J1 176 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 NMUR1Q9HB89 426 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 SPHK2Q9NRA0 654 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSC2-220ENST00000568238 NAGPAQ9UK23 515 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ABCA7Q8IZY2 2146 aa13.55□□□□□ -0.24
TSC2-220ENST00000568238 ANTXRLA6NF34 631 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 GREM1O60565 184 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 ALDH1A2O94788 518 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 KLF8O95600 359 aaPredicted RBP13.54□□□□□ -0.24
TSC2-220ENST00000568238 TPM2P07951 284 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 TIE1P35590 1138 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 TNFRSF4P43489 277 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 RAD23BP54727 409 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 CRY1Q16526 586 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 PLK5Q496M5 336 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
TSC2-220ENST00000568238 C10orf120Q5SQS8 335 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 PHTF2Q8N3S3 785 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 NAT16Q8N8M0 369 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 IL17RCQ8NAC3 791 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 TXNDC5Q8NBS9 432 aaKnown RBP13.54□□□□□ -0.24
TSC2-220ENST00000568238 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 MDGA1Q8NFP4 955 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 CDK5RAP1Q96SZ6 601 aaKnown RBP13.54□□□□□ -0.24
TSC2-220ENST00000568238 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 VPS16Q9H269 839 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 LIMA1Q9UHB6 759 aaKnown RBP13.54□□□□□ -0.24
TSC2-220ENST00000568238 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 COQ4Q9Y3A0 265 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
TSC2-220ENST00000568238 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TBC1D3BA6NDS4 549 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 GOLGA6L19H0YKK7 550 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 DCLK1O15075 740 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 MDM4O15151 490 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 PMM2O15305 246 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 P4HA2O15460 535 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 TULP3O75386 442 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 RHOBTB1O94844 696 aa13.53□□□□□ -0.24
TSC2-220ENST00000568238 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
TSC2-220ENST00000568238 RALAP11233 206 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms