RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OSBPL6Q9BZF3 934 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 TTYH3Q9C0H2 523 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 NACA2Q9H009 215 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 MIS12Q9H081 205 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 C8orf33Q9H7E9 229 aaPredicted RBP10.27□□□□□ -0.77
CLK3-220ENST00000567992 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 RASAL2Q9UJF2 1139 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.77
CLK3-220ENST00000567992 A0A1W2PQC6 194 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 MAN2B1O00754 1011 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 ABCB7O75027 752 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 STC2O76061 302 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 LTFP02788 710 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 KLKB1P03952 638 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 ERBB2P04626 1255 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 DCNP07585 359 aaKnown RBP10.26□□□□□ -0.77
CLK3-220ENST00000567992 MMEP08473 750 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 ACADSBP45954 432 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 KPNA1P52294 538 aaPredicted RBP10.26□□□□□ -0.77
CLK3-220ENST00000567992 FMO1Q01740 532 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 UBXN2BQ14CS0 331 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 BTBD8Q5XKL5 378 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 HTR3DQ70Z44 454 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 TADA2BQ86TJ2 420 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 CPA6Q8N4T0 437 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 FAM3CQ92520 227 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 CLDN23Q96B33 292 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 PPP1R13BQ96KQ4 1090 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 PCMTD1Q96MG8 357 aaPredicted RBP10.26□□□□□ -0.77
CLK3-220ENST00000567992 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 ABCC13Q9NSE7 274 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 MARCH2Q9P0N8 246 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 SIT1Q9Y3P8 196 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 CACNA1HO95180 2353 aa10.26□□□□□ -0.77
CLK3-220ENST00000567992 WDR87Q6ZQQ6 2873 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 FAM170BA6NMN3 283 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SLC9A3R1O14745 358 aaPredicted RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 MSI1O43347 362 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 NFATC1O95644 943 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SERPINC1P01008 464 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 IGLV3-27P01718 113 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 CHRNB1P11230 501 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 COL9A1P20849 921 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 KRT9P35527 623 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 OPRD1P41143 372 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 STAT1P42224 750 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 ZNF445P59923 1031 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 NOMO3P69849 1222 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 CDR2Q01850 454 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 CCINQ13939 588 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 PON2Q15165 354 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 DHCR24Q15392 516 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 TAF5Q15542 800 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 TRIP4Q15650 581 aaPredicted RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 FILIP1LQ4L180 1135 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 E4F1Q66K89 784 aaPredicted RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 FSTL4Q6MZW2 842 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 RHBDF2Q6PJF5 856 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 OLFML1Q6UWY5 402 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 FAM183BPQ6ZVS7 135 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 RSRC2Q7L4I2 434 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 BEND5Q7L4P6 421 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 ZNF677Q86XU0 584 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 FMNL3Q8IVF7 1028 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 DQX1Q8TE96 717 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 EZH1Q92800 747 aaPredicted RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 OTUB2Q96DC9 234 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SPAG5Q96R06 1193 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 PCDHB18PQ96TA0 734 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SYT11Q9BT88 431 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 FBRSL1Q9HCM7 1045 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 OLA1Q9NTK5 396 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 TBC1D14Q9P2M4 693 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SFMBT1Q9UHJ3 866 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
CLK3-220ENST00000567992 NAALADL1Q9UQQ1 740 aa10.25□□□□□ -0.77
CLK3-220ENST00000567992 SLC12A8A0AV02 714 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 FAM170AA1A519 330 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 GOLGA6L19H0YKK7 550 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 STK25O00506 426 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 TRDMT1O14717 391 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 SART1O43290 800 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 LSM8O95777 96 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 IGLV3-25P01717 112 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 CYP1A1P04798 512 aaPredicted RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 HMBSP08397 361 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 DEKP35659 375 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 RPS9P46781 194 aaKnown RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 GABRB2P47870 512 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 NUBP1P53384 320 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 TPM4P67936 248 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 PITX1P78337 314 aaPredicted RBP10.24□□□□□ -0.77
CLK3-220ENST00000567992 COG7P83436 770 aa10.24□□□□□ -0.77
CLK3-220ENST00000567992 MESP2Q0VG99 397 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms