RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.42■■□□□ 1.82
FANCA-228ENST00000567943 SMG5Q9UPR3 1016 aaKnown RBP26.42■■□□□ 1.82
FANCA-228ENST00000567943 M0QYV0 167 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 ATG13O75143 517 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 ADH1CP00326 375 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 EEF1GP26641 437 aaKnown RBP26.41■■□□□ 1.82
FANCA-228ENST00000567943 PLA2G4AP47712 749 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 PXNP49023 591 aaPredicted RBP26.41■■□□□ 1.82
FANCA-228ENST00000567943 STILQ15468 1287 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 ARHGAP44Q17R89 818 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 LONP2Q86WA8 852 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 ETFBKMTQ8IXQ9 262 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 ULBP1Q9BZM6 244 aa26.41■■□□□ 1.82
FANCA-228ENST00000567943 EIF2DP41214 584 aaKnown RBP26.4■■□□□ 1.82
FANCA-228ENST00000567943 Q6ZNB5 142 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 USP33Q8TEY7 942 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 RUBCNQ92622 972 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 P2RY11Q96G91 374 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 SIX2Q9NPC8 291 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 SPHK2Q9NRA0 654 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 TAB2Q9NYJ8 693 aa26.4■■□□□ 1.82
FANCA-228ENST00000567943 A0A0A0MRY4 1105 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 HOXC11O43248 304 aaPredicted RBP26.39■■□□□ 1.82
FANCA-228ENST00000567943 STC2O76061 302 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 ZBED1O96006 694 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 KLKB1P03952 638 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 RALAP11233 206 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 ADIGQ0VDE8 80 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 SYT13Q7L8C5 426 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 SLC35F5Q8WV83 523 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 SECISBP2LQ93073 1101 aaKnown RBP26.39■■□□□ 1.82
FANCA-228ENST00000567943 PNKPQ96T60 521 aa26.39■■□□□ 1.82
FANCA-228ENST00000567943 USP8P40818 1118 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 RGS7P49802 495 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 SEC13P55735 322 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 YWHAGP61981 247 aaKnown RBP eCLIP26.38■■□□□ 1.81
FANCA-228ENST00000567943 GAD2Q05329 585 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 CDKAL1Q5VV42 579 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 CAVIN1Q6NZI2 390 aaKnown RBP26.38■■□□□ 1.81
FANCA-228ENST00000567943 PMF1Q6P1K2 205 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 WDR5BQ86VZ2 330 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 MIB1Q86YT6 1006 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 SIX6OS1Q8N1H7 587 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 ARHGAP18Q8N392 663 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 NAT16Q8N8M0 369 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 KCTD13Q8WZ19 329 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 HHIPQ96QV1 700 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 FANCLQ9NW38 375 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 AJAP1Q9UKB5 411 aaPredicted RBP26.38■■□□□ 1.81
FANCA-228ENST00000567943 SLC8A2Q9UPR5 921 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 SPAG17Q6Q759 2223 aa26.38■■□□□ 1.81
FANCA-228ENST00000567943 BECN2A8MW95 431 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 TRIM24O15164 1050 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 LETM1O95202 739 aaPredicted RBP26.37■■□□□ 1.81
FANCA-228ENST00000567943 KAT7O95251 611 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 LCP1P13796 627 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 TYRO3Q06418 890 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 EFEMP1Q12805 493 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 LPAL2Q16609 132 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 C2orf27AQ580R0 203 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 TADA2BQ86TJ2 420 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 ACP6Q9NPH0 428 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 DNAJC12Q9UKB3 198 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 SDK1Q7Z5N4 2213 aa26.37■■□□□ 1.81
FANCA-228ENST00000567943 YJEFN3A6XGL0 299 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 E7ENQ6 273 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 TULP3O75386 442 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 GNA15P30679 374 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 MYL5Q02045 173 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 KDSRQ06136 332 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 KCNMA1Q12791 1236 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 DMC1Q14565 340 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 ANO4Q32M45 955 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 EMC10Q5UCC4 262 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 SHC3Q92529 594 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 CDK5RAP1Q96SZ6 601 aaKnown RBP26.36■■□□□ 1.81
FANCA-228ENST00000567943 VPS16Q9H269 839 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 ARHGEF4Q9NR80 690 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 RASAL2Q9UJF2 1139 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 CEP250Q9BV73 2442 aa26.36■■□□□ 1.81
FANCA-228ENST00000567943 PIK3R2O00459 728 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 THAP12O43422 761 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 KIR2DL1P43626 348 aaPredicted RBP26.35■■□□□ 1.81
FANCA-228ENST00000567943 GOLGA8FQ08AF8 430 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 GOLGA8DPQ0D2H9 430 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 KRT31Q15323 416 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 CAMKK1Q8N5S9 505 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 MARK1Q9P0L2 795 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 MARCH2Q9P0N8 246 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 LSM7Q9UK45 103 aaKnown RBP26.35■■□□□ 1.81
FANCA-228ENST00000567943 HCN2Q9UL51 889 aa26.35■■□□□ 1.81
FANCA-228ENST00000567943 CCDC163A0A0D9SF12 145 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 MED7O43513 233 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 APODP05090 189 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 HNRNPLP14866 589 aaKnown RBP eCLIP26.34■■□□□ 1.81
FANCA-228ENST00000567943 TGM1P22735 817 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 CNR2P34972 360 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 GRIA2P42262 883 aa26.34■■□□□ 1.81
FANCA-228ENST00000567943 SIM2Q14190 667 aaPredicted RBP26.34■■□□□ 1.81
FANCA-228ENST00000567943 DPY19L2P1Q6NXN4 242 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms