RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PDE4CQ08493 712 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 STIM1Q13586 685 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ELF2Q15723 593 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 USP39Q53GS9 565 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ARMCX6Q7L4S7 300 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ZNF513Q8N8E2 541 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 NETO1Q8TDF5 533 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 KAT5Q92993 513 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 SLC35C1Q96A29 364 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 P2RY11Q96G91 374 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ZC3H10Q96K80 434 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ACOX2Q99424 681 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 ULBP1Q9BZM6 244 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 TSPAN16Q9UKR8 245 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
GTF3C1-208ENST00000567843 TCRBV21S2A2A0A5A6 115 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 PIK3R2O00459 728 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 SLC30A4O14863 429 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 STC2O76061 302 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 KLKB1P03952 638 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 SDHBP21912 280 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 TNFRSF4P43489 277 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 FMO5P49326 533 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 DHPSP49366 369 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 EGFLAMQ63HQ2 1017 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 TERB1Q8NA31 727 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 ANKRD52Q8NB46 1076 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 LOXL4Q96JB6 756 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 PNPLA8Q9NP80 782 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 COQ4Q9Y3A0 265 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 MYO16Q9Y6X6 1858 aa12.84□□□□□ -0.35
GTF3C1-208ENST00000567843 A0A0A0MRY4 1105 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 SLC12A8A0AV02 714 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 ALDH1A2O94788 518 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 ZNF806P0C7X5 589 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 RGS7P49802 495 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 SGO2Q562F6 1265 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 TMEM270Q6UE05 265 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 Q6ZNB5 142 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 DENND1CQ8IV53 801 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 TFAP2BQ92481 460 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 EDEM1Q92611 657 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 DHTKD1Q96HY7 919 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 XPO6Q96QU8 1125 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 LRRC4Q9HBW1 653 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 WDR35Q9P2L0 1181 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 PCDHB4Q9Y5E5 795 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 EML5Q05BV3 1969 aa12.83□□□□□ -0.36
GTF3C1-208ENST00000567843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PATE3B3GLJ2 98 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 MAP3K13O43283 966 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 CAVIN2O95810 425 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 ZBED1O96006 694 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 LCP1P13796 627 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 HOXB2P14652 356 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 DGKGP49619 791 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PSEN1P49768 467 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 SLC8A3P57103 927 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 MORC3Q14149 939 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PPM1JQ5JR12 505 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 IL31Q6EBC2 164 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 KLHDC10Q6PID8 442 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 RRAGAQ7L523 313 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 TADA2BQ86TJ2 420 aa12.82□□□□□ -0.36
GTF3C1-208ENST00000567843 TMEFF1Q8IYR6 380 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms