RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 TAF5Q15542 800 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 ATPAF2Q8N5M1 289 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 PCDH20Q8N6Y1 951 aaKnown RBP12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 CALML6Q8TD86 181 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 TNIP3Q96KP6 325 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 RIC8BQ9NVN3 520 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 TMEM161AQ9NX61 479 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 NTSR2O95665 410 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 NR3C2P08235 984 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MPP3Q13368 585 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PERM1Q5SV97 790 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM43BQ6ZT52 329 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF554Q86TJ5 538 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MTERF3Q96E29 417 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 RBBP8Q99708 897 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF556Q9HAH1 456 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 SLC5A4Q9NY91 659 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM32AQ9Y421 112 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PTGES3LE9PB15 166 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 C6orf222P0C671 652 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 NELFEP18615 380 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PPP4CP60510 307 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PRKAA1Q13131 559 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 KHDC1Q4VXA5 237 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 AGAP9Q5VTM2 703 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 SEMA4DQ92854 862 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MRPS26Q9BYN8 205 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 RNF103O00237 685 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 WBP4O75554 376 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 GSNP06396 782 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 FESP07332 822 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 SREBF1P36956 1147 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MTMR2Q13614 643 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF235Q14590 738 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 INAQ16352 499 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 GALNT15Q8N3T1 639 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PABPC5Q96DU9 382 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PLEKHG4BQ96PX9 1271 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CD274Q9NZQ7 290 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CCDC167Q9P0B6 97 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 AP4B1Q9Y6B7 739 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PMPCBO75439 489 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 APBA3O96018 575 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 ATP5BP06576 529 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 FCGR1AP12314 374 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 UQCRBP14927 111 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CYP24A1Q07973 514 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 HGSNATQ68CP4 663 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 TWF2Q6IBS0 349 aaKnown RBP12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 CAPSLQ8WWF8 208 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 OTULINQ96BN8 352 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MED15Q96RN5 788 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
CSPG4P13-202ENST00000567704 MYO5BQ9ULV0 1848 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 NDUFS3O75489 264 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 IL5RAQ01344 420 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 NR1D2Q14995 579 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF606Q8WXB4 792 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 WDR41Q9HAD4 459 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 TRPC7Q9HCX4 862 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM8A1Q9UBU6 413 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZMYM2Q9UBW7 1377 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 C15orf38-AP3S2A0A0A6YYH1 394 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 TAF4O00268 1085 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 MRASO14807 208 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 ZNF862O60290 1169 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 TSC22D2O75157 780 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 CSDE1O75534 798 aaKnown RBP12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 BAIAP3O94812 1187 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 MYO1DO94832 1006 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 CALCAP01258 141 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 ABHD2P08910 425 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 USP46P62068 366 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 PDK2Q15119 407 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 CCDC142Q17RM4 750 aa12.75□□□□□ -0.37
CSPG4P13-202ENST00000567704 CEP78Q5JTW2 689 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms