RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 C12orf29Q8N999 325 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 C12orf50Q8NA57 414 aaPredicted RBP10.94□□□□□ -0.66
LINC00564-201ENST00000567258 TSTD1Q8NFU3 115 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 BAP1Q92560 729 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 FAXDC2Q96IV6 333 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 HEXIM2Q96MH2 286 aaKnown RBP10.94□□□□□ -0.66
LINC00564-201ENST00000567258 HHIPQ96QV1 700 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 HNRNPABQ99729 332 aaKnown RBP10.94□□□□□ -0.66
LINC00564-201ENST00000567258 SMOQ99835 787 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 CCSER2Q9H7U1 834 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 FBRSL1Q9HCM7 1045 aaKnown RBP10.94□□□□□ -0.66
LINC00564-201ENST00000567258 CSNK1G1Q9HCP0 422 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 TMEM30AQ9NV96 361 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 GMIPQ9P107 970 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 PCDHGC3Q9UN70 934 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 PCDHA5Q9Y5H7 936 aa10.94□□□□□ -0.66
LINC00564-201ENST00000567258 PSMA7O14818 248 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 SCAMP3O14828 347 aaKnown RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 TLR5O60602 858 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 RHOBTB1O94844 696 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 CYP17A1P05093 508 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 RALAP11233 206 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 PPP1R2P41236 205 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 PRCPP42785 496 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 MRPS21P82921 87 aaKnown RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 NNTQ13423 1086 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 CSRP2Q16527 193 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 ANO4Q32M45 955 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 ZNF394Q53GI3 561 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 USP39Q53GS9 565 aaKnown RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 C1orf220Q5T0J3 134 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 C11orf74Q86VG3 221 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 SMYD4Q8IYR2 804 aaPredicted RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 LOXL4Q96JB6 756 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 CDK5RAP1Q96SZ6 601 aaKnown RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 RTKNQ9BST9 563 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 FAM124BQ9H5Z6 455 aaPredicted RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 PNPLA8Q9NP80 782 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
LINC00564-201ENST00000567258 ARHGEF4Q9NR80 690 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 SEMA4GQ9NTN9 838 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 RAB20Q9NX57 234 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 IL37Q9NZH6 218 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 CEP250Q9BV73 2442 aa10.93□□□□□ -0.66
LINC00564-201ENST00000567258 DCHS1Q96JQ0 3298 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 FAM92AA1XBS5 289 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 TBC1D3BA6NDS4 549 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 SLC16A3O15427 465 aaKnown RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 CILPO75339 1184 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 BEST1O76090 585 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 KAT7O95251 611 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 GBP1P32455 592 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 CLCN1P35523 988 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 OPRD1P41143 372 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 GRIA2P42262 883 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 ZXDBP98169 803 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 KDSRQ06136 332 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 CETN1Q12798 172 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 HSF5Q4G112 596 aaPredicted RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 AASDHQ4L235 1098 aaPredicted RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 ZCWPW2Q504Y3 356 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 C10orf120Q5SQS8 335 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 LY6G5CQ5SRR4 150 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 RHBDF2Q6PJF5 856 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 CLEC20AQ6ZU45 233 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 TRMT11Q7Z4G4 463 aaKnown RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 CCDC33Q8N5R6 958 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 NETO1Q8TDF5 533 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 EEF2KMTQ96G04 330 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 TIGD1Q96MW7 591 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 XPO6Q96QU8 1125 aaKnown RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 DUSP16Q9BY84 665 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 APOBEC3GQ9HC16 384 aaKnown RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 SPHK2Q9NRA0 654 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 EVA1BQ9NVM1 165 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 BCCIPQ9P287 314 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 DEC1Q9P2X7 70 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 ARMCX3Q9UH62 379 aaPredicted RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 EBF1Q9UH73 591 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 NAGPAQ9UK23 515 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 MMP17Q9ULZ9 603 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 SCML2Q9UQR0 700 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.92□□□□□ -0.66
LINC00564-201ENST00000567258 GPR179Q6PRD1 2367 aa10.92□□□□□ -0.66
LINC00564-201ENST00000567258 ABCA7Q8IZY2 2146 aa10.91□□□□□ -0.66
LINC00564-201ENST00000567258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms