RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SPTLC3Q9NUV7 552 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ADAM22Q9P0K1 906 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 CALCOCO1Q9P1Z2 691 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TMEM59LQ9UK28 342 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ARHGAP26Q9UNA1 814 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 NR2E1Q9Y466 385 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZFP37Q9Y6Q3 630 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 NUMBLQ9Y6R0 609 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 NYNRINQ9P2P1 1898 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 MSI1O43347 362 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 RTN2O75298 545 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 GRAP2O75791 330 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 LCA5LO95447 670 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ABL1P00519 1130 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 IGLV3-27P01718 113 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 FTLP02792 175 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 CALB1P05937 261 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 GLI1P08151 1106 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 TCF3P15923 654 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 TFE3P19532 575 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 AVPR1AP37288 418 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 VIPR2P41587 438 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 YWHAZP63104 245 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 EIF4EBP2Q13542 120 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 ZNF268Q14587 947 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 TJAP1Q5JTD0 557 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 EFHC1Q5JVL4 640 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 C10orf120Q5SQS8 335 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 TANGO2Q6ICL3 276 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 PLEKHA7Q6IQ23 1121 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ALKBH5Q6P6C2 394 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 VITQ6UXI7 678 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 RAD9BQ6WBX8 426 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 BNIPLQ7Z465 357 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 PHLDB2Q86SQ0 1253 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 VPS36Q86VN1 386 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 EMC1Q8N766 993 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 MSANTD4Q8NCY6 345 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 JOSD2Q8TAC2 188 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 RSAD2Q8WXG1 361 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 ARHGEF26Q96DR7 871 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 KXD1Q9BQD3 176 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH13-208ENST00000566333 RPP25Q9BUL9 199 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 KLF16Q9BXK1 252 aaPredicted RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 PLA2G2FQ9BZM2 168 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 POPDC2Q9HBU9 364 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ABCC13Q9NSE7 274 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 TDP1Q9NUW8 608 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 SMPD4Q9NXE4 827 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 SSUH2Q9Y2M2 353 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 REXO2Q9Y3B8 237 aaKnown RBP8.54□□□□□ -1.04
CDH13-208ENST00000566333 CPQQ9Y646 472 aa8.54□□□□□ -1.04
CDH13-208ENST00000566333 MUC22E2RYF6 1773 aaPredicted RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 C2CD4BA6NLJ0 364 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 HEPACAM2A8MVW5 462 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ARNTLO00327 626 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 IRAK2O43187 625 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ECI2O75521 394 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ASGR2P07307 311 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MBL2P11226 248 aaPredicted RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 RALAP11233 206 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 NCAM1P13591 858 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 HDCP19113 662 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 GSDMDP57764 484 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 SNX16P57768 344 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 RPL7AP62424 266 aaKnown RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 CCZ1BP86790 482 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 CCZ1P86791 482 aaPredicted RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 OGDHQ02218 1023 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 FCHO2Q0JRZ9 810 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 EFEMP1Q12805 493 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MAMLD1Q13495 774 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 TSR1Q2NL82 804 aaKnown RBP8.53□□□□□ -1.04
CDH13-208ENST00000566333 RAB6CQ53S08 254 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 BTBD8Q5XKL5 378 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 PPP1R2P3Q6NXS1 205 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 DNAJC24Q6P3W2 148 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 Q6ZNB5 142 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MTSS1LQ765P7 747 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ARCQ7LC44 396 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 MIB1Q86YT6 1006 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 DEFB106AQ8N104 65 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ADAM32Q8TC27 787 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 SH3RF2Q8TEC5 729 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 NT5C3BQ969T7 300 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ELSPBP1Q96BH3 223 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 ZNF653Q96CK0 615 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 VCPIP1Q96JH7 1222 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
CDH13-208ENST00000566333 CDK5RAP1Q96SZ6 601 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms