RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CLCN4P51793 760 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 CACNA2D1P54289 1103 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 DRG2P55039 364 aaKnown RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 RPL7AP62424 266 aaKnown RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 DEUP1Q05D60 604 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 TWF1Q12792 350 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 NNTQ13423 1086 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 CYP1B1Q16678 543 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 LRIT3Q3SXY7 679 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 ARHGAP15Q53QZ3 475 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 C2CD6Q53TS8 623 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 BSPRYQ5W0U4 402 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 CC2D1AQ6P1N0 951 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 DEFB106AQ8N104 65 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 EXD1Q8NHP7 514 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 CCDC26Q8TAB7 109 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 SLC7A14Q8TBB6 771 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 COG1Q8WTW3 980 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 TEKT4Q8WW24 435 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 AUTS2Q8WXX7 1259 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 RNF34Q969K3 372 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 MRPL38Q96DV4 380 aaKnown RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 PGAP3Q96FM1 320 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 RHOBTB2Q9BYZ6 727 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 ASAH2Q9NR71 780 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 DONSONQ9NYP3 566 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
SF3B3-207ENST00000566095 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 PATJQ8NI35 1801 aa10.25□□□□□ -0.77
SF3B3-207ENST00000566095 CEP290O15078 2479 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 ZNF197O14709 1029 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 NDC80O14777 642 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 ADAM12O43184 909 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 GRAP2O75791 330 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 APOEP02649 317 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 ERVFC1P60507 584 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 TAF10Q12962 218 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 DHX34Q14147 1143 aaKnown RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 PDK2Q15119 407 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 CCDC142Q17RM4 750 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 ERCC6LQ2NKX8 1250 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 BRMS1LQ5PSV4 323 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 FAM109BQ6ICB4 259 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 MSANTD2Q6P1R3 559 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 DRICH1Q6PGQ1 229 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 LILRA6Q6PI73 481 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 KLHDC10Q6PID8 442 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 SYDE1Q6ZW31 735 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 GPRIN1Q7Z2K8 1008 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 DNAAF5Q86Y56 855 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 RCOR2Q8IZ40 523 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 C12orf50Q8NA57 414 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 JOSD2Q8TAC2 188 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 SCAMP5Q8TAC9 235 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 GIPC2Q8TF65 315 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 FAM172AQ8WUF8 416 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 MRPS31Q92665 395 aaKnown RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 SMOC2Q9H3U7 446 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 NSUN3Q9H649 340 aaKnown RBP10.24□□□□□ -0.77
SF3B3-207ENST00000566095 TJP2Q9UDY2 1190 aa10.24□□□□□ -0.77
SF3B3-207ENST00000566095 FAM187AA6NFU0 413 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 YJEFN3A6XGL0 299 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 E7ENQ6 273 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 M0QYT0 321 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CLASP2O75122 1294 aaKnown RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 ZMYND10O75800 440 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 ZRANB2O95218 330 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 SEC24AO95486 1093 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 PTPN2P17706 415 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 ATF6P18850 670 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CCR1P32246 355 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CHRNA3P32297 505 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 HTR7P34969 479 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 ATP5C1P36542 298 aaKnown RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 FLT3P36888 993 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 PBX2P40425 430 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 FNTAP49354 379 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 COG7P83436 770 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 ATP11AP98196 1134 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 LMNB2Q03252 620 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 KRT81Q14533 505 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 DUSP6Q16828 381 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CDO1Q16878 200 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CCDC14Q49A88 953 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 EFHC2Q5JST6 749 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 SNX30Q5VWJ9 437 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 NUGGCQ68CJ6 796 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 SCYL2Q6P3W7 929 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 DDX42Q86XP3 938 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 UNC45BQ8IWX7 931 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 PIAS4Q8N2W9 510 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 EMC1Q8N766 993 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CENPIQ92674 756 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 CFAP57Q96MR6 1250 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 NPY6RQ99463 290 aa10.23□□□□□ -0.77
SF3B3-207ENST00000566095 DDX50Q9BQ39 737 aaKnown RBP10.23□□□□□ -0.77
SF3B3-207ENST00000566095 SFXN1Q9H9B4 322 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms