RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DMAP1Q9NPF5 467 aaPredicted RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 CD93Q9NPY3 652 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 ITM2CQ9NQX7 267 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 DNAJC17Q9NVM6 304 aaKnown RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
RNF40-208ENST00000565995 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
RNF40-208ENST00000565995 NPC1O15118 1278 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 CD6P30203 668 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 PGFP49763 221 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 IFRD2Q12894 506 aaPredicted RBP13.49□□□□□ -0.25
RNF40-208ENST00000565995 KLHDC10Q6PID8 442 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 PNPLA1Q8N8W4 532 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 SCFD1Q8WVM8 642 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 SYAP1Q96A49 352 aaPredicted RBP13.49□□□□□ -0.25
RNF40-208ENST00000565995 TNIP3Q96KP6 325 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 FBXO44Q9H4M3 255 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 CYLDQ9NQC7 956 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 GMIPQ9P107 970 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
RNF40-208ENST00000565995 WASH3PC4AMC7 463 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 NEDD8-MDP1E9PL57 170 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 TLR5O60602 858 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 DLATP10515 647 aaKnown RBP13.48□□□□□ -0.25
RNF40-208ENST00000565995 MAOBP27338 520 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 STAT6P42226 847 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 DGKGP49619 791 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 MYL6P60660 151 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 CLDN10P78369 228 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 BMT2Q1RMZ1 405 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 Q6ZNB5 142 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 C12orf56Q8IXR9 622 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 CRYBG2Q8N1P7 616 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 MDM1Q8TC05 714 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 SMOQ99835 787 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 LRRC27Q9C0I9 530 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 TNMDQ9H2S6 317 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.258e-7■■■■■ 108.6
RNF40-208ENST00000565995 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
RNF40-208ENST00000565995 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
RNF40-208ENST00000565995 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
RNF40-208ENST00000565995 ARID1BQ8NFD5 2236 aaPredicted RBP13.48□□□□□ -0.25
RNF40-208ENST00000565995 METTL12A8MUP2 240 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 BEST1O76090 585 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 OXTRP30559 389 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 CDH8P55286 799 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 BNC1Q01954 994 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 EHHADHQ08426 723 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 TRPC3Q13507 836 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 CAMK2BQ13554 666 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 SLC39A14Q15043 492 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 IL27RAQ6UWB1 636 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 XXYLT1Q8NBI6 393 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 TOE1Q96GM8 510 aaKnown RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 CDC6Q99741 560 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 PCED1AQ9H1Q7 454 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 THAP10Q9P2Z0 257 aaPredicted RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
RNF40-208ENST00000565995 SCML2Q9UQR0 700 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 STON1Q9Y6Q2 735 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 DOCK9Q9BZ29 2069 aa13.47□□□□□ -0.25
RNF40-208ENST00000565995 UBE4BO95155 1302 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 AP1G2O75843 785 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 CER1O95813 267 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 TBX18O95935 607 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 IRF1P10914 325 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 NCAM1P13591 858 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 TPMTP51580 245 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 AP3M2P53677 418 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 GOLGA8FQ08AF8 430 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 GOLGA8DPQ0D2H9 430 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 E2F4Q16254 413 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 FUT11Q495W5 492 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 TPGS1Q6ZTW0 290 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 SCUBE3Q8IX30 993 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
RNF40-208ENST00000565995 TMEM174Q8WUU8 243 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 HPS3Q969F9 1004 aa13.46□□□□□ -0.25
RNF40-208ENST00000565995 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms