RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 NHEJ1Q9H9Q4 299 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-214ENST00000565274 SDHAF3Q9NRP4 125 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 PLSCR4Q9NRQ2 329 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 GLRX2Q9NS18 164 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 MTRF1LQ9UGC7 380 aaKnown RBP5.4□□□□□ -1.54
CAPN3-214ENST00000565274 FETUBQ9UGM5 382 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 ZMYND8Q9ULU4 1186 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-214ENST00000565274 CLEC4AQ9UMR7 237 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 CFL2Q9Y281 166 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 SLC5A6Q9Y289 635 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 GMEB1Q9Y692 573 aa5.4□□□□□ -1.54
CAPN3-214ENST00000565274 MYPNQ86TC9 1320 aa5.4□□□□□ -1.55
CAPN3-214ENST00000565274 SNED1Q8TER0 1413 aa5.4□□□□□ -1.55
CAPN3-214ENST00000565274 A0A096LPE4 126 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 LOC105371267A0A1B0GV96 52 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 A0A1W2PPZ6 126 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 E2F8A0AVK6 867 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 TRIM49BA6NDI0 452 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 OR5K4A6NMS3 321 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 B4DLN1 442 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 KRIT1O00522 736 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 E2F3O00716 465 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 HAT1O14929 419 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ZNF263O14978 683 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 MEFVO15553 781 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 DYNC1LI2O43237 492 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 SLC22A3O75751 556 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ALDH1A2O94788 518 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 TRIM16O95361 564 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 PAPLNO95428 1278 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CYP3A4P08684 503 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 DLATP10515 647 aaKnown RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CYP2A6P11509 494 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 IL10P22301 178 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 FGFR4P22455 802 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 JAK1P23458 1154 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CDC25CP30307 473 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 VPS41P49754 854 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CLCN4P51793 760 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 MRPS15P82914 257 aaKnown RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 FKBP3Q00688 224 aaKnown RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CYP27A1Q02318 531 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ZBTB16Q05516 673 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 GRSF1Q12849 480 aaKnown RBP eCLIP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 BNIP3Q12983 259 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 SPA17Q15506 151 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 TMEM266Q2M3C6 531 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 EDRF1Q3B7T1 1238 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 FBXW10Q5XX13 1052 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 NEPROQ6NW34 567 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 C11orf88Q6PI97 169 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 B3GNT6Q6ZMB0 384 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC81Q6ZN84 652 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 C4orf50Q6ZRC1 276 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 KDELC2Q7Z4H8 507 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 HEATR3Q7Z4Q2 680 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 TPH2Q8IWU9 490 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 REXO1Q8N1G1 1221 aaKnown RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 GOLM1Q8NBJ4 401 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 KIAA0895Q8NCT3 520 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 SPATA4Q8NEY3 305 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 OR52K1Q8NGK4 314 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 HERVK_113Q902F9 699 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 RAD54LQ92698 747 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 HDAC2Q92769 488 aaKnown RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 GPRASP2Q96D09 838 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 DNAJC19Q96DA6 116 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ACSBG1Q96GR2 724 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 SNF8Q96H20 258 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC42Q96M95 316 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ZIM3Q96PE6 472 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ALS2CR12Q96Q35 445 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CRAMP1Q96RY5 1269 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 EYA3Q99504 573 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CGREF1Q99674 301 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CCT7Q99832 543 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 GAL3ST1Q99999 423 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 YIPF4Q9BSR8 244 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 NRSN2Q9GZP1 204 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 NDST4Q9H3R1 872 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CAAP1Q9H8G2 361 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 ACTR5Q9H9F9 607 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CD209Q9NNX6 404 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 AGPAT5Q9NUQ2 364 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 MTMR4Q9NYA4 1195 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 TFCP2L1Q9NZI6 479 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 LRWD1Q9UFC0 647 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CRYL1Q9Y2S2 319 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 C15orf41Q9Y2V0 281 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 CAPN6Q9Y6Q1 641 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 PITPNM2Q9BZ72 1349 aa5.39□□□□□ -1.55
CAPN3-214ENST00000565274 BAZ2AQ9UIF9 1905 aaKnown RBP5.38□□□□□ -1.55
CAPN3-214ENST00000565274 DDX60LQ5H9U9 1706 aaKnown RBP5.38□□□□□ -1.55
CAPN3-214ENST00000565274 PNMA6FA0A0J9YX94 578 aa5.38□□□□□ -1.55
CAPN3-214ENST00000565274 A0A1B0GUA9 196 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms