RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TEX44Q53QW1 395 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CES3Q6UWW8 571 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ARPINQ7Z6K5 226 aa21.23■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NFASCO94856 1347 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 A0A1B0GTW7 788 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HMX2A2RU54 273 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MAGEB3O15480 346 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PEX1O43933 1283 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PRKG1Q13976 671 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PRAMEF18Q5VWM3 479 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FRMD7Q6ZUT3 714 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 WDR75Q8IWA0 830 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 THNSL1Q8IYQ7 743 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PEBP4Q96S96 227 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NTPCRQ9BSD7 190 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PLAC1Q9HBJ0 212 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 USP18Q9UMW8 372 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 POMPQ9Y244 141 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RBBP6Q7Z6E9 1792 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TCRBV5S1A1TA0A578 114 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 AIM2O14862 343 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SIN3BO75182 1162 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 LYPLA2O95372 231 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 BPGMP07738 259 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SERPINA6P08185 405 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FAM200BP0CF97 657 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TCN1P20061 433 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TMED1Q13445 227 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TRPC3Q13507 836 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TLR1Q15399 786 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 LRRC38Q5VT99 294 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 UNC5AQ6ZN44 842 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NME8Q8N427 588 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ICA1LQ8NDH6 482 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DEPDC1BQ8WUY9 529 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 C7orf26Q96N11 449 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PPP1R16BQ96T49 567 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CEP41Q9BYV8 373 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ATXN10Q9UBB4 475 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CDH22Q9UJ99 828 aa21.22■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SDR42E2A6NKP2 422 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 JAK3P52333 1124 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 R3HDM1Q15032 1099 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ZC3H12AQ5D1E8 599 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TMCO4Q5TGY1 634 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PIWIL1Q96J94 861 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 OLFM3Q96PB7 478 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 COMMD3-BMI1R4GMX3 469 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 AHDC1Q5TGY3 1603 aaPredicted RBP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 KRT7P08729 469 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 OSBPP22059 807 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MAP3K10Q02779 954 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 N4BP2L1Q5TBK1 243 aaPredicted RBP21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TRIM74Q86UV6 250 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TRIM73Q86UV7 250 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TNS4Q8IZW8 715 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ARHGAP28Q9P2N2 729 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FEM1BQ9UK73 627 aa21.21■□□□□ 0.99
MAP1LC3B-206ENST00000564844 NEMP1O14524 444 aa21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TBXAS1P24557 533 aaPredicted RBP21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 ALDH1B1P30837 517 aa21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SERPINB5P36952 375 aa21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 TBL3Q12788 808 aaKnown RBP21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MAP7Q14244 749 aa21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PRPF18Q99633 342 aaKnown RBP21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 LIN28AQ9H9Z2 209 aaKnown RBP21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 SIRPGQ9P1W8 387 aa21.2■□□□□ 0.99
MAP1LC3B-206ENST00000564844 APOC4-APOC2K7ER74 178 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FKBP6O75344 327 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 APOC2P02655 101 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 HMGCRP04035 888 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ERBB2P04626 1255 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SRGAP2CP0DJJ0 459 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 SLC1A6P48664 564 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 GTF2A2P52657 109 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PGGT1BP53609 377 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 KRT76Q01546 638 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MYBPC3Q14896 1274 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TMEM132AQ24JP5 1023 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 FAM102AQ5T9C2 384 aaPredicted RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PTAR1Q7Z6K3 402 aaPredicted RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CAND1Q86VP6 1230 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ZNF513Q8N8E2 541 aaPredicted RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TTC13Q8NBP0 860 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 USP13Q92995 863 aaPredicted RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 UBAP1Q9NZ09 502 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 HMGXB4Q9UGU5 601 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 MRPS22P82650 360 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 EMC2Q15006 297 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 EEPD1Q7L9B9 569 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 TMEM174Q8WUU8 243 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PRPF31Q8WWY3 499 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 POPDC2Q9HBU9 364 aa21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 NGRNQ9NPE2 291 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 DNAAF2Q9NVR5 837 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3B-206ENST00000564844 DGAT1O75907 488 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 ARRB2P32121 409 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 CHN2P52757 468 aa21.19■□□□□ 0.98
MAP1LC3B-206ENST00000564844 PKNOX1P55347 436 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms