RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MDH1BQ5I0G3 518 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 MROH9Q5TGP6 573 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 MPP5Q8N3R9 675 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.164e-9■■■□□ 16.2
GTF3C1-205ENST00000564747 FAM172AQ8WUF8 416 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 ACAP3Q96P50 834 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 MAGEB5Q9BZ81 275 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 C20orf27Q9GZN8 174 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 RNPEPQ9H4A4 650 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 ZNF180Q9UJW8 692 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 MAD1L1Q9Y6D9 718 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 HMX2A2RU54 273 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 EME2A4GXA9 379 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 TBX10O75333 385 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 PSMG1O95456 288 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 APOEP02649 317 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 ATICP31939 592 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 VHLP40337 213 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 PDK2Q15119 407 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 BOLA3Q53S33 107 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 NOL9Q5SY16 702 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 PMF1Q6P1K2 205 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 LCLAT1Q6UWP7 414 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 ILDR2Q71H61 639 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 SCUBE3Q8IX30 993 aa16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.05■□□□□ 0.16
GTF3C1-205ENST00000564747 A0A087WZ62 844 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 DPPA5A6NC42 116 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 B2RBV5 119 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 METTL18O95568 372 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 P4HA1P13674 534 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 ACADSP16219 412 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 VGLL4Q14135 290 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 C11orf91Q3C1V1 193 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 NUDCD3Q8IVD9 361 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 FBXO16Q8IX29 292 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SNRNP25Q9BV90 132 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 VRTNQ9H8Y1 702 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PCMTD2Q9NV79 361 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PPARGC1AQ9UBK2 798 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 BCLAF3A2AJT9 711 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 TFE3P19532 575 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 TGM2P21980 687 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PGM1P36871 562 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 GRIA1P42261 906 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 OCRLQ01968 901 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 CBLBQ13191 982 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 CMPK2Q5EBM0 449 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 LGSNQ5TDP6 509 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SLC9A4Q6AI14 798 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 NDUFAF2Q8N183 169 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 FGD4Q96M96 766 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 C7orf26Q96N11 449 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SH3GL3Q99963 347 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 FRMD8Q9BZ67 464 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SIRPGQ9P1W8 387 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 CAPN14A8MX76 684 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 H3BRJ5 948 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 FZD9O00144 591 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 TUBP50607 506 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SARNPP82979 210 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 THOC5Q13769 683 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 AMHR2Q16671 573 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PPP1R26Q5T8A7 1209 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SMYD5Q6GMV2 418 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 ZNF534Q76KX8 674 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SCG3Q8WXD2 468 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 SIGLEC10Q96LC7 697 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 B3GNT5Q9BYG0 378 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PDZD7Q9H5P4 517 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
GTF3C1-205ENST00000564747 AMPD1P23109 780 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 CCNFP41002 786 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 ERFP50548 548 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 AQP5P55064 265 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 SLC10A2Q12908 348 aaPredicted RBP16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 TMEM132DQ14C87 1099 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 TEX44Q53QW1 395 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 ATG16L1Q676U5 607 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 OLFML1Q6UWY5 402 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 ZCCHC23Q6ZST2 131 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 MMADHCQ9H3L0 296 aaPredicted RBP16.03■□□□□ 0.16
GTF3C1-205ENST00000564747 ASB7Q9H672 318 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms