RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 NAT16Q8N8M0 369 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 TERB1Q8NA31 727 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 ANKRD52Q8NB46 1076 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 MDGA1Q8NFP4 955 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 SEMA4DQ92854 862 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 MMRN2Q9H8L6 949 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 OSER1Q9NX31 292 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 NAGPAQ9UK23 515 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 GFRA2O00451 464 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 PMM2O15305 246 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 MAP3K13O43283 966 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 IRF1P10914 325 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 TYRP14679 529 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 ZNF132P52740 706 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 RAD23BP54727 409 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 KDSRQ06136 332 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 MESP2Q0VG99 397 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 PNOCQ13519 176 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 STIM1Q13586 685 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 RAB41Q5JT25 222 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 RNF43Q68DV7 783 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 PM20D1Q6GTS8 502 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 SLC36A4Q6YBV0 504 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 Q6ZNB5 142 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 SCD5Q86SK9 330 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 ENGASEQ8NFI3 743 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 NMUR1Q9HB89 426 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 DNAJC17Q9NVM6 304 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 ARMCX3Q9UH62 379 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 FBXO10Q9UK96 956 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 STRIP2Q9ULQ0 834 aa12.81□□□□□ -0.36
GTF3C1-204ENST00000564664 NEDD8-MDP1E9PL57 170 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 ZNF217O75362 1048 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 HNRNPLP14866 589 aaKnown RBP eCLIP12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 TBXAS1P24557 533 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 HOXD12P35452 270 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 CCDC6Q16204 474 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 ZNF394Q53GI3 561 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 C10orf76Q5T2E6 689 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 FOXR2Q6PJQ5 311 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 TTC30AQ86WT1 665 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 SMYD4Q8IYR2 804 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 WBP2Q969T9 261 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 JAKMIP2Q96AA8 810 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 CEP63Q96MT8 703 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 EVLQ9UI08 416 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 SLC27A6Q9Y2P4 619 aa12.8□□□□□ -0.36
GTF3C1-204ENST00000564664 ACACBO00763 2458 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 TCRBV21S2A2A0A5A6 115 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 PSMA7O14818 248 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 AP5Z1O43299 807 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 STC2O76061 302 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 CISD3P0C7P0 127 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 VDRP11473 427 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 DGKGP49619 791 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 CETN1Q12798 172 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 LMAN2Q12907 356 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 CUL2Q13617 745 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 SGO2Q562F6 1265 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 TPGS1Q6ZTW0 290 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 RABEPKQ7Z6M1 372 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 SYT12Q8IV01 421 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 HMGB4Q8WW32 186 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 TATDN2Q93075 761 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 GABRG3Q99928 467 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 RXFP3Q9NSD7 469 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 OLA1Q9NTK5 396 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 HESX1Q9UBX0 185 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 INVSQ9Y283 1065 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 THADAQ6YHU6 1953 aa12.79□□□□□ -0.36
GTF3C1-204ENST00000564664 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 P4HA2O15460 535 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 TIMM44O43615 452 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 ZBED1O96006 694 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 PENKP01210 267 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CYBBP04839 570 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms