RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 DEF6Q9H4E7 631 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 GKN1Q9NS71 199 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 TDP1Q9NUW8 608 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 ASNSD1Q9NWL6 643 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 STRIP2Q9ULQ0 834 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
KARS-204ENST00000564578 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
KARS-204ENST00000564578 AKR1B10O60218 316 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 HSF2BPO75031 334 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 CALB1P05937 261 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 RALAP11233 206 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 FLT3P36888 993 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 GSDMDP57764 484 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
KARS-204ENST00000564578 HTR4Q13639 388 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 C10orf120Q5SQS8 335 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
KARS-204ENST00000564578 TMTC1Q8IUR5 882 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 RSAD2Q8WXG1 361 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
KARS-204ENST00000564578 PACSIN1Q9BY11 444 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 CD320Q9NPF0 282 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 ARHGAP26Q9UNA1 814 aa13.04□□□□□ -0.32
KARS-204ENST00000564578 LCA5LO95447 670 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 EIF4EBP2Q13542 120 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 DCAF6Q58WW2 860 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 PLEKHA7Q6IQ23 1121 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 MSANTD2Q6P1R3 559 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 ARCQ7LC44 396 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 NT5C3BQ969T7 300 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 WBP2Q969T9 261 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 KLF16Q9BXK1 252 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 KCNK12Q9HB15 430 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 CPQQ9Y646 472 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 NUMBLQ9Y6R0 609 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 SIGLEC16A6NMB1 481 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 GREM1O60565 184 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 KRT3P12035 628 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 ABCB4P21439 1286 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 MATKP42679 507 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 GALCP54803 685 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 EFEMP1Q12805 493 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 MIB1Q86YT6 1006 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 EMC1Q8N766 993 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 DQX1Q8TE96 717 aaKnown RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 CDK5RAP1Q96SZ6 601 aaKnown RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 ZFP14Q9HCL3 533 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
KARS-204ENST00000564578 MARCH2Q9P0N8 246 aa13.03□□□□□ -0.32
KARS-204ENST00000564578 DAB1O75553 588 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 IGLV3-25P01717 112 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 ASGR2P07307 311 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 TJAP1Q5JTD0 557 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 OTUD1Q5VV17 481 aaPredicted RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 VITQ6UXI7 678 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 ADAM32Q8TC27 787 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 RNF139Q8WU17 664 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 ELSPBP1Q96BH3 223 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 KXD1Q9BQD3 176 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 TRIM7Q9C029 511 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 NACA2Q9H009 215 aa13.02□□□□□ -0.32
KARS-204ENST00000564578 OLA1Q9NTK5 396 aaKnown RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 EPN1Q9Y6I3 576 aaPredicted RBP13.02□□□□□ -0.32
KARS-204ENST00000564578 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 HEPACAM2A8MVW5 462 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 LEFTY2O00292 366 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 CAPN9O14815 690 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms