RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 BBS2Q9BXC9 721 aa25.15■■□□□ 1.62
NME3-206ENST00000564252 DNMT3LQ9UJW3 386 aa25.15■■□□□ 1.62
NME3-206ENST00000564252 CIZ1Q9ULV3 898 aaPredicted RBP25.15■■□□□ 1.62
NME3-206ENST00000564252 TYRP14679 529 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 Q6ZNB5 142 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 TPGS1Q6ZTW0 290 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 LPCAT2Q7L5N7 544 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 SMYD4Q8IYR2 804 aaPredicted RBP25.14■■□□□ 1.62
NME3-206ENST00000564252 EEF2KMTQ96G04 330 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 XPO6Q96QU8 1125 aaKnown RBP25.14■■□□□ 1.62
NME3-206ENST00000564252 WDR35Q9P2L0 1181 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 NAGPAQ9UK23 515 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 USP3Q9Y6I4 520 aa25.14■■□□□ 1.62
NME3-206ENST00000564252 CEP295Q9C0D2 2601 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 NTSR1P30989 418 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 PLA2G4AP47712 749 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 PSEN1P49768 467 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 ZNF394Q53GI3 561 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 C10orf120Q5SQS8 335 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 EGFLAMQ63HQ2 1017 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 TMEFF1Q8IYR6 380 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 PGBD3Q8N328 593 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 ZNF276Q8N554 614 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 PIGKQ92643 395 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 FAXDC2Q96IV6 333 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 DNAI2Q9GZS0 605 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 GDPD2Q9HCC8 539 aa25.13■■□□□ 1.61
NME3-206ENST00000564252 CDX4O14627 284 aaPredicted RBP25.12■■□□□ 1.61
NME3-206ENST00000564252 MAP3K13O43283 966 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 HOXB2P14652 356 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 GABRG2P18507 467 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 WASP42768 502 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 PTGER3P43115 390 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 MXI1P50539 228 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 IRX4P78413 519 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 BYSLQ13895 437 aaKnown RBP25.12■■□□□ 1.61
NME3-206ENST00000564252 TOGARAM2Q6ZUX3 1019 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 ARMCX6Q7L4S7 300 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 SLC4A11Q8NBS3 891 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 FBXL13Q8NEE6 735 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 HEXIM2Q96MH2 286 aaKnown RBP25.12■■□□□ 1.61
NME3-206ENST00000564252 CD248Q9HCU0 757 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 TMEM9BQ9NQ34 198 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 CISHQ9NSE2 258 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 RAB20Q9NX57 234 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 EVLQ9UI08 416 aaPredicted RBP25.12■■□□□ 1.61
NME3-206ENST00000564252 ANGPTL2Q9UKU9 493 aa25.12■■□□□ 1.61
NME3-206ENST00000564252 A0A1W2PQF6 199 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 PRRT4C9JH25 899 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 STC2O76061 302 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 SPDYCQ5MJ68 293 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 DAB2IPQ5VWQ8 1189 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 PSAPL1Q6NUJ1 521 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 TADA2BQ86TJ2 420 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 P2RY11Q96G91 374 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 ACOX2Q99424 681 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 ARID3AQ99856 593 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 CLIC5Q9NZA1 410 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 USP24Q9UPU5 2620 aa25.11■■□□□ 1.61
NME3-206ENST00000564252 CISD3P0C7P0 127 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 RAD23BP54727 409 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 PNOCQ13519 176 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 SYT12Q8IV01 421 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 TTC39CQ8N584 583 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 TMEM176AQ96HP8 235 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 TMEM74BQ9NUR3 256 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 CALCOCO1Q9P1Z2 691 aa25.1■■□□□ 1.61
NME3-206ENST00000564252 CETN3O15182 167 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 EPB41P11171 864 aaKnown RBP25.09■■□□□ 1.61
NME3-206ENST00000564252 RALAP11233 206 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 DGKGP49619 791 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 SHC2P98077 582 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 TRIM61Q5EBN2 209 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 CHPFQ8IZ52 775 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 TATDN2Q93075 761 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 BHMTQ93088 406 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 CDK5RAP1Q96SZ6 601 aaKnown RBP25.09■■□□□ 1.61
NME3-206ENST00000564252 GABRG3Q99928 467 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 FAM124BQ9H5Z6 455 aaPredicted RBP25.09■■□□□ 1.61
NME3-206ENST00000564252 FBXO10Q9UK96 956 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 GON4LQ3T8J9 2241 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 FRYQ5TBA9 3013 aa25.09■■□□□ 1.61
NME3-206ENST00000564252 STX10O60499 249 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 KLKB1P03952 638 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 PRCPP42785 496 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 NOVA1P51513 510 aaKnown RBP25.08■■□□□ 1.61
NME3-206ENST00000564252 RAB41Q5JT25 222 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 PEAR1Q5VY43 1037 aaPredicted RBP25.08■■□□□ 1.61
NME3-206ENST00000564252 LYSMD4Q5XG99 296 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 ARHGAP17Q68EM7 881 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 FMR1NBQ8N0W7 255 aaPredicted RBP25.08■■□□□ 1.61
NME3-206ENST00000564252 IPO4Q8TEX9 1081 aaKnown RBP25.08■■□□□ 1.61
NME3-206ENST00000564252 CCDC34Q96HJ3 373 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 UBXN6Q9BZV1 441 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 PLK2Q9NYY3 685 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 RASAL2Q9UJF2 1139 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 PILRBQ9UKJ0 227 aa25.08■■□□□ 1.61
NME3-206ENST00000564252 ZFHX4Q86UP3 3567 aa25.07■■□□□ 1.6
NME3-206ENST00000564252 GIPC1O14908 333 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms