RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 MYO16Q9Y6X6 1858 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 KCNK5O95279 499 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 BCKDHBP21953 392 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 NOVA1P51513 510 aaKnown RBP10.05□□□□□ -0.8
CLN6-203ENST00000563917 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
CLN6-203ENST00000563917 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 STIM1Q13586 685 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 BECN1Q14457 450 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 STARD3Q14849 445 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 UAP1L1Q3KQV9 507 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 TRIM61Q5EBN2 209 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 DCAF17Q5H9S7 520 aaPredicted RBP10.05□□□□□ -0.8
CLN6-203ENST00000563917 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 CCDC186Q7Z3E2 898 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 MIB1Q86YT6 1006 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 ETFBKMTQ8IXQ9 262 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 TMEFF1Q8IYR6 380 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 OLIG1Q8TAK6 271 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 TMEM176AQ96HP8 235 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 SLC32A1Q9H598 525 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 APOBEC3GQ9HC16 384 aaKnown RBP10.05□□□□□ -0.8
CLN6-203ENST00000563917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLN6-203ENST00000563917 RAB20Q9NX57 234 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 CLIC5Q9NZA1 410 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 HESX1Q9UBX0 185 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 RASAL2Q9UJF2 1139 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 STARD13Q9Y3M8 1113 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 SPTBN2O15020 2390 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 THADAQ6YHU6 1953 aa10.05□□□□□ -0.8
CLN6-203ENST00000563917 LNP1A1A4G5 178 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 CACNG3O60359 315 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 NDUFS2O75306 463 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 CFIP05156 583 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 HOXD12P35452 270 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 WASP42768 502 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 KIF11P52732 1056 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 FKBP3Q00688 224 aaKnown RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 ARID5AQ03989 594 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 CETN1Q12798 172 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 EFEMP1Q12805 493 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 ST3GAL2Q16842 350 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 C1orf220Q5T0J3 134 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 N4BP2L1Q5TBK1 243 aaPredicted RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 GPRIN1Q7Z2K8 1008 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 CEP76Q8TAP6 659 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 GSDMAQ96QA5 445 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 TWNKQ96RR1 684 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 UBXN6Q9BZV1 441 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 LRRC4Q9HBW1 653 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 ZDHHC4Q9NPG8 344 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 CISHQ9NSE2 258 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 MARK1Q9P0L2 795 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 EVLQ9UI08 416 aaPredicted RBP10.04□□□□□ -0.8
CLN6-203ENST00000563917 NUDT5Q9UKK9 219 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
CLN6-203ENST00000563917 MYOFQ9NZM1 2061 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 HHLA1C9JL84 531 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 GFRA2O00451 464 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 TM4SF5O14894 197 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 NPC1O15118 1278 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 MDM4O15151 490 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 SLC16A3O15427 465 aaKnown RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 SYNCRIPO60506 623 aaKnown RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 ADAM23O75077 832 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLN6-203ENST00000563917 CD19P15391 556 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 MAPK8P45983 427 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 HARS2P49590 506 aaKnown RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 MESP2Q0VG99 397 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 DUOXA1Q1HG43 343 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 SGO2Q562F6 1265 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 SYCP2LQ5T4T6 812 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 EGFLAMQ63HQ2 1017 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 RGL4Q8IZJ4 473 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 SIX6OS1Q8N1H7 587 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 HDDC3Q8N4P3 179 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 ZNF276Q8N554 614 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 ANKRD52Q8NB46 1076 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 IPO4Q8TEX9 1081 aaKnown RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 FOXJ1Q92949 421 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 BHMTQ93088 406 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 SMARCE1Q969G3 411 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 WBP2Q969T9 261 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 EEF2KMTQ96G04 330 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 NMUR1Q9HB89 426 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 OLA1Q9NTK5 396 aaKnown RBP10.03□□□□□ -0.8
CLN6-203ENST00000563917 OSER1Q9NX31 292 aa10.03□□□□□ -0.8
CLN6-203ENST00000563917 MARCH2Q9P0N8 246 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms