RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ODF2LQ9ULJ1 636 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 HPSEQ9Y251 543 aa16.89■□□□□ 0.29
RNF40-205ENST00000563909 KNL1Q8NG31 2342 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
RNF40-205ENST00000563909 SLC28A2O43868 658 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 C6P13671 934 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 BDNFP23560 247 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 ANXA13P27216 316 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 PCSK1P29120 753 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 SYKP43405 635 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 RHDQ02161 417 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 LY6DQ14210 128 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 E2F4Q16254 413 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 MYCT1Q8N699 235 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 REEP2Q9BRK0 252 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 USP36Q9P275 1121 aaKnown RBP16.88■□□□□ 0.29
RNF40-205ENST00000563909 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 CABIN1Q9Y6J0 2220 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 MYH11P35749 1972 aa16.88■□□□□ 0.29
RNF40-205ENST00000563909 PRRT4C9JH25 899 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 PCDHGA12O60330 932 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 KRT18P05783 430 aaKnown RBP16.87■□□□□ 0.29
RNF40-205ENST00000563909 OXTRP30559 389 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
RNF40-205ENST00000563909 TPMTP51580 245 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 NDUFA8P51970 172 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 AMPD3Q01432 767 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 KCNH2Q12809 1159 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 TAF10Q12962 218 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 BBS7Q8IWZ6 715 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 CEP57L1Q8IYX8 460 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 CEP295NLQ96MC4 621 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 TNMDQ9H2S6 317 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 DACH1Q9UI36 760 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 ANKRD6Q9Y2G4 727 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 SH3BP1Q9Y3L3 701 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 SLCO1B1Q9Y6L6 691 aa16.87■□□□□ 0.29
RNF40-205ENST00000563909 TRIM66O15016 1216 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 TRAK2O60296 914 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 BRINP1O60477 761 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 FAM13AO94988 1023 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 LHX1P48742 406 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 CCT8P50990 548 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 PSMC1P62191 440 aaKnown RBP16.86■□□□□ 0.29
RNF40-205ENST00000563909 IL9RQ01113 521 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 STARD3Q14849 445 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 FUT11Q495W5 492 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 ADGRF2Q8IZF7 708 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 SNX19Q92543 992 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 MYLPFQ96A32 169 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 ZFRQ96KR1 1074 aaKnown RBP16.86■□□□□ 0.29
RNF40-205ENST00000563909 MKRN2Q9H000 416 aaKnown RBP16.86■□□□□ 0.29
RNF40-205ENST00000563909 PARVGQ9HBI0 331 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 PCDHGA1Q9Y5H4 931 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 SNX9Q9Y5X1 595 aa16.86■□□□□ 0.29
RNF40-205ENST00000563909 ANKRD63C9JTQ0 380 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 H0Y8X5 98 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 GOLGA6L22H0YM25 854 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 GFRA2O00451 464 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 GABRDO14764 452 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 ITGB3P05106 788 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 SLFN14P0C7P3 912 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 ACTN2P35609 894 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 ZNF131P52739 623 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 UBE2HP62256 183 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 NOP14P78316 857 aaKnown RBP16.85■□□□□ 0.29
RNF40-205ENST00000563909 TFAMQ00059 246 aaKnown RBP16.85■□□□□ 0.29
RNF40-205ENST00000563909 CYP27A1Q02318 531 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 TEAD4Q15561 434 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 INAVAQ3KP66 663 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 TDRD10Q5VZ19 366 aaKnown RBP16.85■□□□□ 0.29
RNF40-205ENST00000563909 IGSF8Q969P0 613 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 SLITRK1Q96PX8 696 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 ZHX3Q9H4I2 956 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 SERTAD1Q9UHV2 236 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 AGO2Q9UKV8 859 aaKnown RBP16.85■□□□□ 0.29
RNF40-205ENST00000563909 STON1Q9Y6Q2 735 aa16.85■□□□□ 0.29
RNF40-205ENST00000563909 COL5A1P20908 1838 aaPredicted RBP16.84■□□□□ 0.29
RNF40-205ENST00000563909 TISP43B9A030 160 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 NEDD8-MDP1E9PL57 170 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 COCHO43405 550 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 ZNF202O95125 648 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 CDK4P11802 303 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 ABCD1P33897 745 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 CSRP3P50461 194 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 GTF2BQ00403 316 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 IFRD2Q12894 506 aaPredicted RBP16.84■□□□□ 0.29
RNF40-205ENST00000563909 PKDCCQ504Y2 493 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 ARHGAP40Q5TG30 622 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 HES3Q5TGS1 186 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms