RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 DUSP9Q99956 384 aaKnown RBP18.58■□□□□ 0.56
NME3-205ENST00000563854 HESX1Q9UBX0 185 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 TSPAN16Q9UKR8 245 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 USP3Q9Y6I4 520 aa18.58■□□□□ 0.56
NME3-205ENST00000563854 DCDC2BA2VCK2 349 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 TULP2O00295 520 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 GREM1O60565 184 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 STC2O76061 302 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 TYRP14679 529 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 HNRNPLP14866 589 aaKnown RBP eCLIP18.57■□□□□ 0.56
NME3-205ENST00000563854 KCNA4P22459 653 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 MPLP40238 635 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 WASP42768 502 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 TNFRSF4P43489 277 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 KIR2DL1P43626 348 aaPredicted RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 BCAT1P54687 386 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 PDE4CQ08493 712 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 TTI2Q6NXR4 508 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 KLHDC10Q6PID8 442 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 PGBD3Q8N328 593 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 ZNF513Q8N8E2 541 aaPredicted RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 TERB1Q8NA31 727 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 ANKRD52Q8NB46 1076 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 UBA3Q8TBC4 463 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 NETO1Q8TDF5 533 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 ERLEC1Q96DZ1 483 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 LOXL4Q96JB6 756 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 CNOT6LQ96LI5 555 aaKnown RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 NT5C1BQ96P26 610 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 XPO6Q96QU8 1125 aaKnown RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 CDK5RAP1Q96SZ6 601 aaKnown RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 DUSP15Q9H1R2 295 aaPredicted RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 POLMQ9NP87 494 aaPredicted RBP18.57■□□□□ 0.56
NME3-205ENST00000563854 CLIC5Q9NZA1 410 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 RALGAPA1Q6GYQ0 2036 aa18.57■□□□□ 0.56
NME3-205ENST00000563854 TCRBV21S2A2A0A5A6 115 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 PPP1R3GB7ZBB8 358 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 RHOBTB1O94844 696 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 BMP6P22004 513 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
NME3-205ENST00000563854 YWHAGP61981 247 aaKnown RBP eCLIP18.56■□□□□ 0.56
NME3-205ENST00000563854 CREB5Q02930 508 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 NUDT18Q6ZVK8 323 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 RASSF3Q86WH2 238 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 ELOA2Q8IYF1 753 aaPredicted RBP18.56■□□□□ 0.56
NME3-205ENST00000563854 ARHGAP18Q8N392 663 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 PPM1KQ8N3J5 372 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 NDRG1Q92597 394 aaKnown RBP18.56■□□□□ 0.56
NME3-205ENST00000563854 ZC3H10Q96K80 434 aaKnown RBP18.56■□□□□ 0.56
NME3-205ENST00000563854 RTKNQ9BST9 563 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 ULBP1Q9BZM6 244 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 FAM124BQ9H5Z6 455 aaPredicted RBP18.56■□□□□ 0.56
NME3-205ENST00000563854 LRRC4Q9HBW1 653 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 PLK2Q9NYY3 685 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 PCDHB4Q9Y5E5 795 aa18.56■□□□□ 0.56
NME3-205ENST00000563854 SLC12A8A0AV02 714 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 XPO1O14980 1071 aaKnown RBP18.55■□□□□ 0.56
NME3-205ENST00000563854 ZBED1O96006 694 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 BCKDHBP21953 392 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
NME3-205ENST00000563854 ADIGQ0VDE8 80 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 BST2Q10589 180 aaKnown RBP18.55■□□□□ 0.56
NME3-205ENST00000563854 CETN1Q12798 172 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 PAK1Q13153 545 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 MORC3Q14149 939 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
NME3-205ENST00000563854 TMEM270Q6UE05 265 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 RLN3Q8WXF3 142 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 IPO9Q96P70 1041 aaKnown RBP18.55■□□□□ 0.56
NME3-205ENST00000563854 MARCH2Q9P0N8 246 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 WDR35Q9P2L0 1181 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 STRIP2Q9ULQ0 834 aa18.55■□□□□ 0.56
NME3-205ENST00000563854 CACNG3O60359 315 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 FOXD2O60548 495 aaPredicted RBP18.54■□□□□ 0.56
NME3-205ENST00000563854 ADAM23O75077 832 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 CHRM1P11229 460 aaPredicted RBP18.54■□□□□ 0.56
NME3-205ENST00000563854 VDRP11473 427 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 HOXB2P14652 356 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 DGKGP49619 791 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 COG7P83436 770 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 RAB41Q5JT25 222 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 EGFLAMQ63HQ2 1017 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 TCEAL6Q6IPX3 200 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 Q6ZNB5 142 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 TOGARAM2Q6ZUX3 1019 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 TRMT11Q7Z4G4 463 aaKnown RBP18.54■□□□□ 0.56
NME3-205ENST00000563854 SIX6OS1Q8N1H7 587 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 KAT5Q92993 513 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 TCEAL3Q969E4 200 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 SPACA7Q96KW9 195 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 UBXN6Q9BZV1 441 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 MARK1Q9P0L2 795 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 PCDHGA5Q9Y5G8 931 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 SPAG17Q6Q759 2223 aa18.54■□□□□ 0.56
NME3-205ENST00000563854 CACNA1AO00555 2505 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 A0A0A0MRY4 1105 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 O00370 1275 aa18.53■□□□□ 0.56
NME3-205ENST00000563854 PIK3R2O00459 728 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms