RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 REC8O95072 547 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 C1SP09871 688 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 KRT10P13645 584 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ACO1P21399 889 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ADSSP30520 456 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 OXTRP30559 389 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 GRIA4P48058 902 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 CSRP3P50461 194 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 TOB1P50616 345 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 GTF2BQ00403 316 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 IL9RQ01113 521 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 DNAJC3Q13217 504 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SHBQ15464 509 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ANO4Q32M45 955 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SNX30Q5VWJ9 437 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 KRT79Q5XKE5 535 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ZSWIM2Q8NEG5 633 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 C8orf48Q96LL4 319 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SYT15Q9BQS2 421 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 REEP2Q9BRK0 252 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 NUP58Q9BVL2 599 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 PCED1AQ9H1Q7 454 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 FOXP1Q9H334 677 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 CPNE5Q9HCH3 593 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SIX4Q9UIU6 781 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 AGO2Q9UKV8 859 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 CDH9Q9ULB4 789 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ODF2LQ9ULJ1 636 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 SNX9Q9Y5X1 595 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 BSNQ9UPA5 3926 aa8.21□□□□□ -1.1
HERPUD1-206ENST00000563343 TEP1Q99973 2627 aaKnown RBP8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 NEDD8-MDP1E9PL57 170 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 K7ENM7 598 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 IL18RAPO95256 599 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ABL1P00519 1130 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ZDHHC11BP0C7U3 371 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 PLA2G4BP0C869 781 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 CDK4P11802 303 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 TYRP14679 529 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 PLCG1P19174 1290 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 SCP2P22307 547 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ACTN2P35609 894 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 TRAPPC10P48553 1259 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ZNF132P52740 706 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 DSG2Q14126 1118 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 TRIM29Q14134 588 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ADALQ6DHV7 355 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 HTR3DQ70Z44 454 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 DPH6Q7L8W6 267 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 GATAD2AQ86YP4 633 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 TMPRSS6Q8IU80 811 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 ENGASEQ8NFI3 743 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 MYCBPAPQ8TBZ2 947 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 SCFD1Q8WVM8 642 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 RFFLQ8WZ73 363 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 MED8Q96G25 268 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 HIC2Q96JB3 615 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 RAB34Q9BZG1 259 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 C6orf106Q9H6K1 298 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 CCSER2Q9H7U1 834 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 IL37Q9NZH6 218 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 EHD2Q9NZN4 543 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 THAP10Q9P2Z0 257 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 SH3BP1Q9Y3L3 701 aa8.2□□□□□ -1.1
HERPUD1-206ENST00000563343 MYO9AB2RTY4 2548 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 NBPF19A0A087WUL8 3843 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 FAM92AA1XBS5 289 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TERTO14746 1132 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TSPAN3O60637 253 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 NTRK1P04629 796 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 WARSP23381 471 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ANXA13P27216 316 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ACSL1P33121 698 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 PRPHP41219 470 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 DGKGP49619 791 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 PGFP49763 221 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TMPRSS3P57727 454 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 CYP27A1Q02318 531 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ORC1Q13415 861 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TMEM119Q4V9L6 283 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ARHGAP40Q5TG30 622 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 BRSK2Q8IWQ3 736 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 PLPP6Q8IY26 295 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ZNF248Q8NDW4 579 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 PDZD8Q8NEN9 1154 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 OVCA2Q8WZ82 227 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 BIRC7Q96CA5 298 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 SIPA1Q96FS4 1042 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 CNDP2Q96KP4 475 aaKnown RBP8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 SLITRK1Q96PX8 696 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 XPO6Q96QU8 1125 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms