RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZNF445P59923 1031 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 EFEMP1Q12805 493 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 TAF5Q15542 800 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 PTPN20Q4JDL3 420 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 TAF3Q5VWG9 929 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 MSANTD2Q6P1R3 559 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 RHBDF2Q6PJF5 856 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 ZNF852Q6ZMS4 543 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 Q6ZNB5 142 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 HTR3DQ70Z44 454 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 RALGPS2Q86X27 583 aaPredicted RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBR1-204ENST00000563239 MIB1Q86YT6 1006 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 BBS7Q8IWZ6 715 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 TTC16Q8NEE8 873 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 CLDN23Q96B33 292 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 SHDQ96IW2 340 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 PPP1R13BQ96KQ4 1090 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 PCDHB18PQ96TA0 734 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 OSBPL6Q9BZF3 934 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 TTYH3Q9C0H2 523 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 MFSD1Q9H3U5 465 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 TSPY26PQ9H489 355 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 C8orf33Q9H7E9 229 aaPredicted RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 FBRSL1Q9HCM7 1045 aaKnown RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 ST7Q9NRC1 585 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 SIT1Q9Y3P8 196 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 HCN4Q9Y3Q4 1203 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 F5P12259 2224 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 MAN2B1O00754 1011 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 SERPINC1P01008 464 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 LTFP02788 710 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 CYP17A1P05093 508 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 CHRNB1P11230 501 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 STAT1P42224 750 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 GABRB2P47870 512 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
UBR1-204ENST00000563239 NOMO3P69849 1222 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 FMO1Q01740 532 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 CDR2Q01850 454 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 MESP2Q0VG99 397 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 UBXN2BQ14CS0 331 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 DHCR24Q15392 516 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 TRIP4Q15650 581 aaPredicted RBP8.94□□□□□ -0.98
UBR1-204ENST00000563239 FILIP1LQ4L180 1135 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 SYPL2Q5VXT5 272 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 BTBD8Q5XKL5 378 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 E4F1Q66K89 784 aaPredicted RBP8.94□□□□□ -0.98
UBR1-204ENST00000563239 OLFML1Q6UWY5 402 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 BEND5Q7L4P6 421 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 IRF2BP2Q7Z5L9 587 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 TADA2BQ86TJ2 420 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 FMNL3Q8IVF7 1028 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 PRSS33Q8NF86 280 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 FAM3CQ92520 227 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
UBR1-204ENST00000563239 ATP2A3Q93084 1043 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 MSANTD3Q96H12 275 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 CDK5RAP1Q96SZ6 601 aaKnown RBP8.94□□□□□ -0.98
UBR1-204ENST00000563239 SYT11Q9BT88 431 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 NACA2Q9H009 215 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 ABCC13Q9NSE7 274 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 MARCH2Q9P0N8 246 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 SFMBT1Q9UHJ3 866 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 RASAL2Q9UJF2 1139 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 NAALADL1Q9UQQ1 740 aa8.94□□□□□ -0.98
UBR1-204ENST00000563239 SLC12A8A0AV02 714 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 FAM170AA1A519 330 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 GFRA2O00451 464 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 STK25O00506 426 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 TRDMT1O14717 391 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 SLC9A3R1O14745 358 aaPredicted RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 MSI1O43347 362 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 LSM8O95777 96 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 IGLV3-27P01718 113 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 CYP1A1P04798 512 aaPredicted RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 HMBSP08397 361 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 CHRM1P11229 460 aaPredicted RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 OPRD1P41143 372 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 SLC6A11P48066 632 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 GALK1P51570 392 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 UBASH3AP57075 661 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 PITX1P78337 314 aaPredicted RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 COG7P83436 770 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 CCINQ13939 588 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 GAS6Q14393 721 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 PON2Q15165 354 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 C2CD6Q53TS8 623 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 FIGNQ5HY92 759 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 TMEM196Q5HYL7 178 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 LY6G5CQ5SRR4 150 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 FSTL4Q6MZW2 842 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 FAM183BPQ6ZVS7 135 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 RSRC2Q7L4I2 434 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms