RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SMTNL1A8MU46 457 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 BECN2A8MW95 431 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 M0QYV0 167 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 TULP2O00295 520 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 MED7O43513 233 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 TLR5O60602 858 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
CDT1-202ENST00000562747 PGFP49763 221 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 TKTL1P51854 596 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 ITPRIPL2Q3MIP1 535 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 FKBP15Q5T1M5 1219 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 KLHDC7AQ5VTJ3 777 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 PM20D1Q6GTS8 502 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 DPY19L2P1Q6NXN4 242 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 KLHDC10Q6PID8 442 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 TADA2BQ86TJ2 420 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 ARHGAP18Q8N392 663 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 SLC35F5Q8WV83 523 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 CHFRQ96EP1 664 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 NACA2Q9H009 215 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 NMUR1Q9HB89 426 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 DUS2Q9NX74 493 aaKnown RBP17.4■□□□□ 0.38
CDT1-202ENST00000562747 CLIC5Q9NZA1 410 aa17.4■□□□□ 0.38
CDT1-202ENST00000562747 SYCE3A1L190 88 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 ZBED1O96006 694 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 RALAP11233 206 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 GNA15P30679 374 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 ATP5C1P36542 298 aaKnown RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 USP8P40818 1118 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 IFNAR2P48551 515 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 RUNX3Q13761 415 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 SCD5Q86SK9 330 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 WDR5BQ86VZ2 330 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 SCML4Q8N228 414 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 ZNF606Q8WXB4 792 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 HSFY1Q96LI6 401 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 CDK5RAP1Q96SZ6 601 aaKnown RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 HSD3B7Q9H2F3 369 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 PLCB1Q9NQ66 1216 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 HPS4Q9NQG7 708 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDT1-202ENST00000562747 OSER1Q9NX31 292 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 SMPD4Q9NXE4 827 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 NAGPAQ9UK23 515 aa17.39■□□□□ 0.37
CDT1-202ENST00000562747 AJAP1Q9UKB5 411 aaPredicted RBP17.39■□□□□ 0.37
CDT1-202ENST00000562747 KIAA1549LQ6ZVL6 1849 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 SLC9A3R1O14745 358 aaPredicted RBP17.38■□□□□ 0.37
CDT1-202ENST00000562747 THAP12O43422 761 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 CALCAP01258 141 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 RARGP13631 454 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 UCHL3P15374 230 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 CNR2P34972 360 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 PXNP49023 591 aaPredicted RBP17.38■□□□□ 0.37
CDT1-202ENST00000562747 ZNF165P49910 485 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 ADIGQ0VDE8 80 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 CCDC6Q16204 474 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 PMF1Q6P1K2 205 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 DHX40Q8IX18 779 aaKnown RBP17.38■□□□□ 0.37
CDT1-202ENST00000562747 SIX6OS1Q8N1H7 587 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 TTC16Q8NEE8 873 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 ATP2A3Q93084 1043 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 ULBP1Q9BZM6 244 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 CNGB3Q9NQW8 809 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 DAAM1Q9Y4D1 1078 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 FHOD1Q9Y613 1164 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 WNT6Q9Y6F9 365 aa17.38■□□□□ 0.37
CDT1-202ENST00000562747 E2F8A0AVK6 867 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 OTOL1A6NHN0 477 aaPredicted RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 LGALS16A8MUM7 142 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 FOXN3O00409 490 aaPredicted RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 ARSAP15289 507 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 HOXA6P31267 233 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 GPD2P43304 727 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 YWHAGP61981 247 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDT1-202ENST00000562747 PTK2Q05397 1052 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 SF3A2Q15428 464 aaKnown RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 EML3Q32P44 896 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 CEP68Q76N32 757 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 APTXQ7Z2E3 356 aaKnown RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 FAM71AQ8IYT1 594 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 CPA6Q8N4T0 437 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 NAA15Q9BXJ9 866 aaKnown RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 ECT2Q9H8V3 914 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 RXFP3Q9NSD7 469 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 POLR3BQ9NW08 1133 aaPredicted RBP17.37■□□□□ 0.37
CDT1-202ENST00000562747 CFAP97Q9P2B7 532 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 TBC1D14Q9P2M4 693 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 DNMT3LQ9UJW3 386 aa17.37■□□□□ 0.37
CDT1-202ENST00000562747 SPAG17Q6Q759 2223 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 NFATC1O95644 943 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 TBX18O95935 607 aa17.36■□□□□ 0.37
CDT1-202ENST00000562747 RPL34P49207 117 aaKnown RBP17.36■□□□□ 0.37
CDT1-202ENST00000562747 RGS7P49802 495 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms