RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TMEM154Q6P9G4 183 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 VIPAS39Q9H9C1 493 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SNTG2Q9NY99 539 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CNPP09543 421 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 THRAP10827 490 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SOX6P35712 828 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ANTXR2P58335 489 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 OTUD4Q01804 1114 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 DNAJC3Q13217 504 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 FNDC3BQ53EP0 1204 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 FBXO47Q5MNV8 452 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 DOK6Q6PKX4 331 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CYP4Z2PQ8N1L4 340 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 DNAJC9Q8WXX5 260 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ATG4AQ8WYN0 398 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 PXMP2Q9NR77 195 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 USP42Q9H9J4 1324 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ERI2A8K979 691 aaKnown RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 ABCB1P08183 1280 aaPredicted RBP11.57□□□□□ -0.56
RPAP1-204ENST00000562303 TBX4P57082 545 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 WDR49Q8IV35 697 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 DNAJB3Q8WWF6 145 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 SYT15Q9BQS2 421 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 USP18Q9UMW8 372 aa11.57□□□□□ -0.56
RPAP1-204ENST00000562303 PRDM15P57071 1507 aaPredicted RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 MED24O75448 989 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 CCR1P32246 355 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 GRK4P32298 578 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 TOMM20Q15388 145 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ZCCHC2Q9C0B9 1178 aaKnown RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 PHACTR1Q9C0D0 580 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 EFCAB1Q9HAE3 211 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 PCDHGA4Q9Y5G9 962 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 H3BRB1 525 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 PON1P27169 355 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 NOS3P29474 1203 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 HSPA13P48723 471 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 GRIK4Q16099 956 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 RAD9BQ6WBX8 426 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 DSG4Q86SJ6 1040 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 EDEM1Q92611 657 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SERPINB12Q96P63 405 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ZNF518BQ9C0D4 1074 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 FBXO44Q9H4M3 255 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 TUT1Q9H6E5 874 aaKnown RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SH3BP4Q9P0V3 963 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SLC2A4P14672 509 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 VEGFAP15692 232 aaPredicted RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 LAMTOR4Q0VGL1 99 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 MARC1Q5VT66 337 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 NECAB2Q7Z6G3 386 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 RGL4Q8IZJ4 473 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 OSCP1Q8WVF1 389 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 FAM120BQ96EK7 910 aaKnown RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 POP1Q99575 1024 aaKnown RBP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ADI1Q9BV57 179 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ATP13A1Q9HD20 1204 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 RBM22Q9NW64 420 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPAP1-204ENST00000562303 AGRPO00253 132 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 CYP11B1P15538 503 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 JAK1P23458 1154 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 MYL6P60660 151 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SEL1L3Q68CR1 1132 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 NLRP9Q7RTR0 991 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 ZIM3Q96PE6 472 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SH3GL1Q99961 368 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 CNPY3Q9BT09 278 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 SPG21Q9NZD8 308 aa11.56□□□□□ -0.56
RPAP1-204ENST00000562303 CSDE1O75534 798 aaKnown RBP11.55□□□□□ -0.56
RPAP1-204ENST00000562303 MTA2O94776 668 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 MACC1Q6ZN28 852 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 CCDC103Q8IW40 242 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 CELF6Q96J87 481 aaKnown RBP11.55□□□□□ -0.56
RPAP1-204ENST00000562303 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 CYP3A43Q9HB55 503 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 LINC00854A0A1B0GVQ3 168 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 DLGAP3O95886 979 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 SERPINF2P08697 491 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 CXCL8P10145 99 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 GHRP10912 638 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 BOP1Q14137 746 aaKnown RBP11.55□□□□□ -0.56
RPAP1-204ENST00000562303 NR6A1Q15406 480 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
RPAP1-204ENST00000562303 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 PPP2R3BQ9Y5P8 575 aa11.55□□□□□ -0.56
RPAP1-204ENST00000562303 RAMP2O60895 175 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms