RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 PPP6R3Q5H9R7 873 aaPredicted RBP17.23■□□□□ 0.35
PKD1-225ENST00000562297 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 KCTD15Q96SI1 283 aaPredicted RBP17.23■□□□□ 0.35
PKD1-225ENST00000562297 DHX35Q9H5Z1 703 aaKnown RBP17.23■□□□□ 0.35
PKD1-225ENST00000562297 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 LRRC4CQ9HCJ2 640 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 PNPLA8Q9NP80 782 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 FZD10Q9ULW2 581 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 USP3Q9Y6I4 520 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
PKD1-225ENST00000562297 MYO16Q9Y6X6 1858 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 DNALI1O14645 258 aaPredicted RBP17.23■□□□□ 0.35
PKD1-225ENST00000562297 MCF2LO15068 1137 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 RBP3P10745 1247 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 CEP85LQ5SZL2 805 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 SCML4Q8N228 414 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 P3H4Q92791 437 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 STAP1Q9ULZ2 295 aa17.23■□□□□ 0.35
PKD1-225ENST00000562297 M0QYT0 321 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 TGM2P21980 687 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 CYP2F1P24903 491 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 GPS1Q13098 491 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 PSTKQ8IV42 348 aaKnown RBP17.22■□□□□ 0.35
PKD1-225ENST00000562297 UNC45BQ8IWX7 931 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 ABI1Q8IZP0 508 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 GOLGA6L1Q8N7Z2 621 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.22■□□□□ 0.35
PKD1-225ENST00000562297 PWWP2AQ96N64 755 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
PKD1-225ENST00000562297 ZCWPW1Q9H0M4 648 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 TMBIM4Q9HC24 238 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 HCSTQ9UBK5 93 aa17.22■□□□□ 0.35
PKD1-225ENST00000562297 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 APOL1O14791 398 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 RIPK2O43353 540 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 IFNB1P01574 187 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 LTFP02788 710 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 OR4Q2P0C623 313 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 RDXP35241 583 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 SLC29A2Q14542 456 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 CCDC25Q86WR0 208 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 PYROXD2Q8N2H3 581 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 IRGQQ8WZA9 623 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 PGAP3Q96FM1 320 aaPredicted RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 CSPG4P5Q96PW8 444 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 TSPYL1Q9H0U9 437 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 MARCH5Q9NX47 278 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 CWC15Q9P013 229 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 KIAA0100Q14667 2235 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 SYN3O14994 580 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 TRAPPC3O43617 180 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 SHBGP04278 402 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 CCL23P55773 120 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 BCAR1P56945 870 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 TLE2Q04725 743 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 RNASEH2BQ5TBB1 312 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 C1orf228Q6PIY5 440 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 TRMT10CQ7L0Y3 403 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 TOX2Q96NM4 488 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 TMPRSS4Q9NRS4 437 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 ADAM28Q9UKQ2 775 aa17.21■□□□□ 0.35
PKD1-225ENST00000562297 TPX2Q9ULW0 747 aaKnown RBP17.21■□□□□ 0.35
PKD1-225ENST00000562297 PLXNA3P51805 1871 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 I6L893 689 aaPredicted RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 TADA2AO75478 443 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 MRPL58Q14197 206 aaKnown RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 TRIM60Q495X7 471 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 VARS2Q5ST30 1063 aaKnown RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 DENND2CQ68D51 928 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 ZC3H18Q86VM9 953 aaKnown RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 NPAS4Q8IUM7 802 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 RELL1Q8IUW5 271 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 ZCCHC9Q8N567 271 aaKnown RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 FAM71DQ8N9W8 422 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 RSAD2Q8WXG1 361 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 EXOC4Q96A65 974 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 SLC9A7Q96T83 725 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 GPR62Q9BZJ7 368 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 USP29Q9HBJ7 922 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
PKD1-225ENST00000562297 CAPN9O14815 690 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 NCAM1P13591 858 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 GOT1P17174 413 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 CYP2C18P33260 490 aa17.2■□□□□ 0.34
PKD1-225ENST00000562297 RPL22P35268 128 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms