RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 S100A14Q9HCY8 104 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 A0A088AWK7 358 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SLC15A5A6NIM6 579 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 MSCO60682 206 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 GRAP2O75791 330 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 MICAL2O94851 1124 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 PDGFRAP16234 1089 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 GPD1P21695 349 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 CRHR1P34998 444 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 RPS6KA3P51812 740 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 PDE1BQ01064 536 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 DYNC1I2Q13409 638 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 CNPY1Q3B7I2 92 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 KYAT3Q6YP21 454 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 MAP7D3Q8IWC1 876 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 ST13P4Q8IZP2 240 aaPredicted RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SLC4A11Q8NBS3 891 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 RAB3IL1Q8TBN0 382 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 KCNN1Q92952 543 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 GORASP1Q9BQQ3 440 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 NRBP2Q9NSY0 501 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 GPATCH2LQ9NWQ4 482 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 CPSF3Q9UKF6 684 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 APOBEC2Q9Y235 224 aaKnown RBP14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 DNAJC16Q9Y2G8 782 aa14.47□□□□□ -0.09
VPS9D1-202ENST00000561976 SDR42E2A6NKP2 422 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 BIRC5O15392 142 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 RNASEH1O60930 286 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 LYPLA1O75608 230 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 HMGCRP04035 888 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PRKCBP05771 671 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 ATP5BP06576 529 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 HOXC6P09630 235 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF143P52747 638 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 EFNA5P52803 228 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CDK18Q07002 472 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 FASTKD1Q53R41 847 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 C16orf46Q6P387 395 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 SESTD1Q86VW0 696 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CDR2LQ86X02 465 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PLD5Q8N7P1 536 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 OR6Y1Q8NGX8 325 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 UBA3Q8TBC4 463 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 RXFP2Q8WXD0 754 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 MCRS1Q96EZ8 462 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 ACO2Q99798 780 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 SHCBP1LQ9BZQ2 653 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PLAC1Q9HBJ0 212 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 APOL1O14791 398 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 AOC1P19801 751 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CDK7P50613 346 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PTPN11Q06124 597 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 LIN52Q52LA3 116 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 RALGPS1Q5JS13 557 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 DHDDSQ86SQ9 333 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 HIPK4Q8NE63 616 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 GSDMBQ8TAX9 411 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 FAM172AQ8WUF8 416 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CCDC124Q96CT7 223 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 ZNF668Q96K58 619 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 MMP19Q99542 508 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CNPY3Q9BT09 278 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 NIFKQ9BYG3 293 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 CYP4F11Q9HBI6 524 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 MKS1Q9NXB0 559 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 HMGXB4Q9UGU5 601 aa14.46□□□□□ -0.09
VPS9D1-202ENST00000561976 PDE5AO76074 875 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 CPOXP36551 454 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 RPL10AP62906 217 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 MED21Q13503 144 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 AAGABQ6PD74 315 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 DENND5BQ6ZUT9 1274 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ARCQ7LC44 396 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 PIWIL2Q8TC59 973 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 TWNKQ96RR1 684 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 SPATA16Q9BXB7 569 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 DMAP1Q9NPF5 467 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 A0A1B0GVG6 124 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 BUD23O43709 281 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ITM2AO43736 263 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ENDOD1O94919 500 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 SERPINB9P50453 376 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 COPAP53621 1224 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 STXBP2Q15833 593 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ZBTB8OSQ8IWT0 167 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 ADGRF2Q8IZF7 708 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 TMEM130Q8N3G9 435 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 MPP5Q8N3R9 675 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 TTLL6Q8N841 843 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 HEXIM2Q96MH2 286 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 VCX3BQ9H321 246 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 VCX3AQ9NNX9 186 aa14.45□□□□□ -0.1
VPS9D1-202ENST00000561976 NGRNQ9NPE2 291 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms