RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 TRIM63Q969Q1 353 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 SDCCAG3Q96C92 435 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 ZNF347Q96SE7 839 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 TCF12Q99081 682 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 BCL7BQ9BQE9 202 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 GCOM2Q9BZD3 368 aaPredicted RBP7.52□□□□□ -1.21
CDH1-203ENST00000561751 RPAP3Q9H6T3 665 aaPredicted RBP7.52□□□□□ -1.21
CDH1-203ENST00000561751 DNAJC18Q9H819 358 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 PSTPIP2Q9H939 334 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 MLXIPLQ9NP71 852 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 CNGB3Q9NQW8 809 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 MAN1C1Q9NR34 630 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 OLFML3Q9NRN5 406 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 TRNAU1APQ9NX07 287 aaKnown RBP7.52□□□□□ -1.21
CDH1-203ENST00000561751 MKS1Q9NXB0 559 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 CNTN3Q9P232 1028 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 GRID1Q9ULK0 1009 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 STRIP2Q9ULQ0 834 aa7.52□□□□□ -1.21
CDH1-203ENST00000561751 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 A0A0G2JND7 137 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 ILVBLA1L0T0 632 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 KRBA1A5PL33 1030 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 MYMKA6NI61 221 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 UNCXA6NJT0 531 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 FAM25EA8MYX2 175 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 H3BRJ5 948 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PDXKO00764 312 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TXNDC9O14530 226 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TEX28O15482 410 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 ZC3H11AO75152 810 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDH1-203ENST00000561751 DNAJB5O75953 348 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 SNRPA1P09661 255 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 FBXO45P0C2W1 286 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 KRT5P13647 590 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 CCDC130P13994 396 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TNFAIP3P21580 790 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PEX2P28328 305 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 ADSLP30566 484 aaPredicted RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 RFC1P35251 1148 aaPredicted RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 ETV4P43268 484 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 STT3AP46977 705 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 SIK1P57059 783 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PPARDQ03181 441 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 GALNT1Q10472 559 aaPredicted RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 ZNF846Q147U1 533 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PSMD6Q15008 389 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TMED2Q15363 201 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 HLFQ16534 295 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TRIM16LQ309B1 348 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 TMEM119Q4V9L6 283 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 STXBP5Q5T5C0 1151 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 ATAD3BQ5T9A4 648 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 CIAPIN1Q6FI81 312 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 RNF207Q6ZRF8 634 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PCGF5Q86SE9 256 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 LACC1Q8IV20 430 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 CHERPQ8IWX8 916 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 SPARTQ8N0X7 666 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 PACRGLQ8N7B6 248 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 SLC43A3Q8NBI5 491 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 OLIG1Q8TAK6 271 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 UHMK1Q8TAS1 419 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 TRIB2Q92519 343 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 RAD54LQ92698 747 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 CLIP3Q96DZ5 547 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 DUS3LQ96G46 650 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 ZNF597Q96LX8 424 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 RBM15Q96T37 977 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDH1-203ENST00000561751 DHRS9Q9BPW9 319 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 CPNE5Q9HCH3 593 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 MRPL40Q9NQ50 206 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 BLOC1S4Q9NUP1 217 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 THG1LQ9NWX6 298 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 TMOD2Q9NZR1 351 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 STK39Q9UEW8 545 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 ASIC3Q9UHC3 531 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 FBXO9Q9UK97 447 aaPredicted RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 DRG1Q9Y295 367 aaKnown RBP7.51□□□□□ -1.21
CDH1-203ENST00000561751 INPP5FQ9Y2H2 1132 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
CDH1-203ENST00000561751 COL1A1P02452 1464 aaPredicted RBP7.5□□□□□ -1.21
CDH1-203ENST00000561751 ARHGEF35A5YM69 484 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 LRRIQ4A6NIV6 560 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 ZBBXA8MT70 800 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 EVPLLA8MZ36 301 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 hCG_1984214I3L0E3 225 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 I3L4J1 428 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 HAT1O14929 419 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 CALUO43852 315 aaPredicted RBP7.5□□□□□ -1.21
CDH1-203ENST00000561751 NUAK1O60285 661 aa7.5□□□□□ -1.21
CDH1-203ENST00000561751 TSPAN1O60635 241 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms