RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
CMTM4-203ENST00000561680 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
CMTM4-203ENST00000561680 OLA1Q9NTK5 396 aaKnown RBP13.23□□□□□ -0.29
CMTM4-203ENST00000561680 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
CMTM4-203ENST00000561680 STAP1Q9ULZ2 295 aa13.23□□□□□ -0.29
CMTM4-203ENST00000561680 NAALADL1Q9UQQ1 740 aa13.23□□□□□ -0.29
CMTM4-203ENST00000561680 MIA3Q5JRA6 1907 aa13.23□□□□□ -0.29
CMTM4-203ENST00000561680 CAPN9O14815 690 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 KIF5CO60282 957 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 TBX10O75333 385 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 PALMO75781 387 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 IGLV3-25P01717 112 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 RARGP13631 454 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 TFE3P19532 575 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 GABRR2P28476 465 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 PITX1P78337 314 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 ACAP1Q15027 740 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 C15orf59Q2T9L4 293 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 SYCE2Q6PIF2 218 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 TMC5Q6UXY8 1006 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 Q7L0L9 218 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 DAAM2Q86T65 1068 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 TRIM58Q8NG06 486 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 CENPIQ92674 756 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 PGAP3Q96FM1 320 aaPredicted RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 CDK5RAP1Q96SZ6 601 aaKnown RBP13.22□□□□□ -0.29
CMTM4-203ENST00000561680 TBCBQ99426 244 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
CMTM4-203ENST00000561680 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 TMEM110-MUSTN1A8MSY1 372 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 ESPNB1AK53 854 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 NRG2O14511 850 aaPredicted RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 TLR5O60602 858 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 ENDOD1O94919 500 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 MYL4P12829 197 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 DESP17661 470 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 COMTP21964 271 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CCR2P41597 374 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 SLC1A1P43005 524 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 SULT1E1P49888 294 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 ATP11AP98196 1134 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CDO1Q16878 200 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 SLC5A9Q2M3M2 681 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 PRSS36Q5K4E3 855 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 HECTD3Q5T447 861 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 STRADAQ7RTN6 431 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 SHKBP1Q8TBC3 707 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 RNF139Q8WU17 664 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 PABPC5Q96DU9 382 aaKnown RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CCSER2Q9H7U1 834 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CLEC1BQ9P126 229 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 ALG6Q9Y672 507 aa13.21□□□□□ -0.29
CMTM4-203ENST00000561680 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 M0QYT0 321 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 IRAK2O43187 625 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 MOSPD3O75425 235 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 LRCH4O75427 683 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 OLFM2O95897 454 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
CMTM4-203ENST00000561680 PFKLP17858 780 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 PCK1P35558 622 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 LTBRP36941 435 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 HDAC4P56524 1084 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 NTHL1P78549 312 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 CYP4F8P98187 520 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
CMTM4-203ENST00000561680 NNTQ13423 1086 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
CMTM4-203ENST00000561680 RAB6CQ53S08 254 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 ZNF569Q5MCW4 686 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 SLC35F6Q8N357 371 aa13.2□□□□□ -0.3
CMTM4-203ENST00000561680 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms