RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CISD3P0C7P0 127 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 CD59P13987 128 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 TRIM21P19474 475 aaKnown RBP12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 NDST1P52848 882 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 CUL4BQ13620 913 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF423Q2M1K9 1284 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ZACNQ401N2 412 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 SCARA5Q6ZMJ2 495 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 TPGS1Q6ZTW0 290 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 C12orf29Q8N999 325 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 SNX21Q969T3 373 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ELMO3Q96BJ8 720 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 MRGPRX1Q96LB2 322 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 HSPA12BQ96MM6 686 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 HNRNPABQ99729 332 aaKnown RBP12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 SUSD2Q9UGT4 822 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 FBXO10Q9UK96 956 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 KLK13Q9UKR3 277 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 CYP8B1Q9UNU6 501 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 PCDHA5Q9Y5H7 936 aa12.48□□□□□ -0.41
CARMIL3-204ENST00000561354 ADAMTS9Q9P2N4 1935 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 CACNA1EQ15878 2313 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 HHLA1C9JL84 531 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 NDUFS2O75306 463 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 GJB3O75712 270 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 AFMP43652 599 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 ASPAP45381 313 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 DGKGP49619 791 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF132P52740 706 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM193AP78312 1265 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 DLG4P78352 724 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 STK4Q13043 487 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 ORC1Q13415 861 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 Q6ZNB5 142 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 SV2AQ7L0J3 742 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 GPRIN1Q7Z2K8 1008 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FOXJ1Q92949 421 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 NMUR1Q9HB89 426 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FAM49BQ9NUQ9 324 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 DNMT3LQ9UJW3 386 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
CARMIL3-204ENST00000561354 PDXKO00764 312 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 NPC1O15118 1278 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 CYP26A1O43174 497 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 KLRC4O43908 158 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 RARGP13631 454 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 GNSP15586 552 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 ACO1P21399 889 aaKnown RBP12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 ADORA2BP29275 332 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 PSEN1P49768 467 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 INCA1Q0VD86 236 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 PLEKHG6Q3KR16 790 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 WDR45BQ5MNZ6 344 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 RESP18Q5W5W9 173 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 TADA2BQ86TJ2 420 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 RGL4Q8IZJ4 473 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 KIAA0895Q8NCT3 520 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 OR2I1PQ8NGU4 316 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 ZDHHC5Q9C0B5 715 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 SLC27A6Q9Y2P4 619 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 NFE2L3Q9Y4A8 694 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 RAD54BQ9Y620 910 aa12.46□□□□□ -0.41
CARMIL3-204ENST00000561354 IGF2RP11717 2491 aa12.46□□□□□ -0.42
CARMIL3-204ENST00000561354 MYH10P35580 1976 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 WASH3PC4AMC7 463 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 MAPK13O15264 365 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 STC2O76061 302 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 NR3C1P04150 777 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CAPNS1P04632 268 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CD6P30203 668 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 ME1P48163 572 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 KIF11P52732 1056 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 ENPP2Q13822 863 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 STARD3Q14849 445 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms