RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 PARVAQ9NVD7 372 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 WNT16Q9UBV4 365 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 ADAMTS1Q9UHI8 967 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 DUSP12Q9UNI6 340 aa11.19□□□□□ -0.62
TPM1-229ENST00000561242 FAM92AA1XBS5 289 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 YJEFN3A6XGL0 299 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 E7ENQ6 273 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 TULP2O00295 520 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 EPHB6O15197 1021 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 GRAP2O75791 330 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 OAS1P00973 400 aaKnown RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 FTLP02792 175 aaPredicted RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 GZMAP12544 262 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 CCR1P32246 355 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 SCNN1AP37088 669 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 SULT1E1P49888 294 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 GPC5P78333 572 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 ZXDAP98168 799 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 PRKCQQ04759 706 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 GAD2Q05329 585 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 C1QBPQ07021 282 aaKnown RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 SIGLEC14Q08ET2 396 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM1-229ENST00000561242 RUNX3Q13761 415 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 PPP2R5DQ14738 602 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 PKDCCQ504Y2 493 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 FAM183BPQ6ZVS7 135 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 SPC24Q8NBT2 197 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 FLCNQ8NFG4 579 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 ST13P5Q8NFI4 369 aaPredicted RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 OSCP1Q8WVF1 389 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 EDAQ92838 391 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 FGF14Q92915 247 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 CPXM1Q96SM3 734 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 WDCPQ9H6R7 721 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM1-229ENST00000561242 DDIT4Q9NX09 232 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 MYO1AQ9UBC5 1043 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 AJAP1Q9UKB5 411 aaPredicted RBP11.18□□□□□ -0.62
TPM1-229ENST00000561242 NUDT5Q9UKK9 219 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 KIAA1671Q9BY89 1806 aa11.18□□□□□ -0.62
TPM1-229ENST00000561242 M0QYT0 321 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 MOSPD3O75425 235 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 TBX18O95935 607 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 ZDHHC11BP0C7U3 371 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
TPM1-229ENST00000561242 PRKCIP41743 596 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 MATKP42679 507 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 FMO1Q01740 532 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 LRRC32Q14392 662 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 UBXN2BQ14CS0 331 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
TPM1-229ENST00000561242 SDE2Q6IQ49 451 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 VITQ6UXI7 678 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 IRF2BP2Q7Z5L9 587 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 DENND1CQ8IV53 801 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 DEFB106AQ8N104 65 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 SIX5Q8N196 739 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 DDI1Q8WTU0 396 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 FAM3CQ92520 227 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 BAP1Q92560 729 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 NDRG1Q92597 394 aaKnown RBP11.17□□□□□ -0.62
TPM1-229ENST00000561242 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 ZNF653Q96CK0 615 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 RNF38Q9H0F5 515 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 NMUR1Q9HB89 426 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 SLC2A4RGQ9NR83 387 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 ABHD10Q9NUJ1 306 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 STIM2Q9P246 746 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 SFMBT1Q9UHJ3 866 aa11.17□□□□□ -0.62
TPM1-229ENST00000561242 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
TPM1-229ENST00000561242 SSU72P8A0A1W2PR75 194 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 FAM170AA1A519 330 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 PAPSS1O43252 624 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 MFAP3LO75121 409 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 DAB1O75553 588 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 MOCS3O95396 460 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TRUB2O95900 331 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 MOCS2O96007 188 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 ERBB2P04626 1255 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 GYPCP04921 128 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 H2AFZP0C0S5 128 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 TCF3P15923 654 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 MMP8P22894 467 aa11.16□□□□□ -0.62
TPM1-229ENST00000561242 CORO1AP31146 461 aaKnown RBP11.16□□□□□ -0.62
TPM1-229ENST00000561242 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms