RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 NGDNQ8NEJ9 315 aaKnown RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 IL31RAQ8NI17 732 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 ZBTB45Q96K62 511 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 ACO2Q99798 780 aaKnown RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 SEMA4BQ9NPR2 832 aaPredicted RBP3.98□□□□□ -1.77
USP8-216ENST00000561206 RIMKLBQ9ULI2 386 aa3.98□□□□□ -1.77
USP8-216ENST00000561206 TTBK1Q5TCY1 1321 aaPredicted RBP3.97□□□□□ -1.77
USP8-216ENST00000561206 TRIM43BA6NCK2 446 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 H7C4K7 107 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 AGPSO00116 658 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 HSPA6P17066 643 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 SLC7A1P30825 629 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 PTDSS1P48651 473 aaKnown RBP3.97□□□□□ -1.77
USP8-216ENST00000561206 GATMP50440 423 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 PGDP52209 483 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 GPC5P78333 572 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 B4GALNT1Q00973 533 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 DEUP1Q05D60 604 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 STIM1Q13586 685 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 ZNF793Q6ZN11 406 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 METTL25Q8N6Q8 603 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 TRIM43Q96BQ3 446 aaPredicted RBP3.97□□□□□ -1.77
USP8-216ENST00000561206 LMLNQ96KR4 655 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 STK32BQ9NY57 414 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 ASAP1Q9ULH1 1129 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 FZD4Q9ULV1 537 aa3.97□□□□□ -1.77
USP8-216ENST00000561206 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 PYCARD-AS1I3L0S3 204 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 FOXN3O00409 490 aaPredicted RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 ACOT8O14734 319 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 FYB1O15117 783 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 INPPL1O15357 1258 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 PIAS2O75928 621 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 PARP1P09874 1014 aaKnown RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 ADRA1DP25100 572 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 TNFRSF8P28908 595 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 CPA2P48052 419 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 KRTAP10-3P60369 221 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 PIN1Q13526 163 aaPredicted RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 KPNB1Q14974 876 aaKnown RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 SF3B4Q15427 424 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP8-216ENST00000561206 ST3GAL2Q16842 350 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 ZBTB34Q8NCN2 500 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 SLC35G2Q8TBE7 412 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 ZCRB1Q8TBF4 217 aaKnown RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 SUCLG2Q96I99 432 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 SLITRK1Q96PX8 696 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 B3GNT5Q9BYG0 378 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 DHX36Q9H2U1 1008 aaKnown RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 MRPL44Q9H9J2 332 aaKnown RBP3.96□□□□□ -1.78
USP8-216ENST00000561206 TMEM8AQ9HCN3 771 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
USP8-216ENST00000561206 A0A1B0GVY2 172 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 C2CD4BA6NLJ0 364 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 RRHO14718 337 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 PLAUP00749 431 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 FGF3P11487 239 aaPredicted RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 CD19P15391 556 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 ITGA8P53708 1063 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 TXNL4AP83876 142 aaKnown RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 PFKFB3Q16875 520 aaPredicted RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 SWSAP1Q6NVH7 229 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 USP49Q70CQ1 688 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 MAEAQ7L5Y9 396 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 ZNF668Q96K58 619 aaPredicted RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 NLRP4Q96MN2 994 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 C22orf23Q9BZE7 217 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 SEMA5BQ9P283 1151 aa3.95□□□□□ -1.78
USP8-216ENST00000561206 NKX1-2Q9UD57 310 aaPredicted RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 RGS17Q9UGC6 210 aaPredicted RBP3.95□□□□□ -1.78
USP8-216ENST00000561206 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
USP8-216ENST00000561206 LINC01565O15544 149 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 MARCH6O60337 910 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 PRAMEF2O60811 474 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 TUSC2O75896 110 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 RASSF9O75901 435 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 CD63P08962 238 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 DDR1Q08345 913 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 ARHGEF7Q14155 803 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 FAM110CQ1W6H9 321 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 PDXDC1Q6P996 788 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 OVCH2Q7RTZ1 564 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 NMD3Q96D46 503 aaKnown RBP3.94□□□□□ -1.78
USP8-216ENST00000561206 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 LRGUKQ96M69 825 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 FCRL5Q96RD9 977 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 TM2D2Q9BX73 214 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 RTFDC1Q9BY42 306 aaPredicted RBP3.94□□□□□ -1.78
USP8-216ENST00000561206 USP29Q9HBJ7 922 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 TMEM45AQ9NWC5 275 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 STEAP1Q9UHE8 339 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
USP8-216ENST00000561206 E2F8A0AVK6 867 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 AQP7P3A6NL99 342 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 FRS3O43559 492 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 TLX3O43711 291 aaPredicted RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 ALDH1L1O75891 902 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 ACVR2AP27037 513 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 JAK3P52333 1124 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 EIF4A1P60842 406 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms