RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 CNPP09543 421 aaKnown RBP23.28■■□□□ 1.32
SNX22-205ENST00000560945 SPATA31D3P0C874 917 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 ATF2P15336 505 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 SLC7A5Q01650 507 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 SPATA31D4Q6ZUB0 917 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 DQX1Q8TE96 717 aaKnown RBP23.28■■□□□ 1.32
SNX22-205ENST00000560945 SPATA17Q96L03 361 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 NAP1L3Q99457 506 aaPredicted RBP23.28■■□□□ 1.32
SNX22-205ENST00000560945 PLVAPQ9BX97 442 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 MYO16Q9Y6X6 1858 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 RDXP35241 583 aaKnown RBP23.27■■□□□ 1.32
SNX22-205ENST00000560945 CDH6P55285 790 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 RPL10AP62906 217 aaKnown RBP23.27■■□□□ 1.32
SNX22-205ENST00000560945 ODF2Q5BJF6 829 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 BTBD8Q5XKL5 378 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 TTC27Q6P3X3 843 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 PYROXD2Q8N2H3 581 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 C1orf54Q8WWF1 131 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 ATG4AQ8WYN0 398 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 WDR6Q9NNW5 1121 aaKnown RBP23.27■■□□□ 1.32
SNX22-205ENST00000560945 DDIT4Q9NX09 232 aa23.27■■□□□ 1.32
SNX22-205ENST00000560945 MAGED2Q9UNF1 606 aaPredicted RBP23.27■■□□□ 1.32
SNX22-205ENST00000560945 I6L893 689 aaPredicted RBP23.26■■□□□ 1.31
SNX22-205ENST00000560945 ZMYND10O75800 440 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 DESP17661 470 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 YWHAQP27348 245 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TAF10Q12962 218 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TMC7Q7Z402 723 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 FBXO32Q969P5 355 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 CALN1Q9BXU9 219 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 FBXO44Q9H4M3 255 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 RXFP1Q9HBX9 757 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 DMGDHQ9UI17 866 aaKnown RBP23.26■■□□□ 1.31
SNX22-205ENST00000560945 YIPF1Q9Y548 306 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.26■■□□□ 1.31
SNX22-205ENST00000560945 FAM92AA1XBS5 289 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 CCDC188H7C350 402 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 RAD51CO43502 376 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 CXCL14O95715 111 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 CA3P07451 260 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 DPYSL3Q14195 570 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TFDP3Q5H9I0 405 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 ERMARDQ5T6L9 678 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TPGS2Q68CL5 300 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TEKT4Q8WW24 435 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 CASP10Q92851 521 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 TCF25Q9BQ70 676 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 FAM204AQ9H8W3 233 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 PCDH18Q9HCL0 1135 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 ABCC13Q9NSE7 274 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 FNIP2Q9P278 1114 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 SFMBT1Q9UHJ3 866 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 AMACRQ9UHK6 382 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 FZD10Q9ULW2 581 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 AP4E1Q9UPM8 1137 aa23.26■■□□□ 1.31
SNX22-205ENST00000560945 PLXNA3P51805 1871 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 GBF1Q92538 1859 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 DYNLT1P63172 113 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 TAZQ16635 292 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 BOLA3Q53S33 107 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 C8orf74Q6P047 294 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 SPPL3Q8TCT6 385 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 HAUS1Q96CS2 278 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 KCTD15Q96SI1 283 aaPredicted RBP23.25■■□□□ 1.31
SNX22-205ENST00000560945 PARD6BQ9BYG5 372 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 DHX35Q9H5Z1 703 aaKnown RBP23.25■■□□□ 1.31
SNX22-205ENST00000560945 MTMR10Q9NXD2 777 aa23.25■■□□□ 1.31
SNX22-205ENST00000560945 ZSCAN5CA6NGD5 496 aaPredicted RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 HIDE1A8MVS5 230 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 MDM4O15151 490 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 MSI1O43347 362 aaKnown RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 PHF2O75151 1096 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 RTN3O95197 1032 aaPredicted RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 IL4RP24394 825 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 TUFMP49411 452 aaKnown RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 COPS2P61201 443 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 SNX1Q13596 522 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 PLPP4Q5VZY2 271 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 MON1AQ86VX9 555 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 GPR161Q8N6U8 529 aaKnown RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 POF1BQ8WVV4 589 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNX22-205ENST00000560945 YBX2Q9Y2T7 364 aaKnown RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 L1CAMP32004 1257 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 PTPN7P35236 360 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 PBX2P40425 430 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 KCNJ1P48048 391 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 KRT81Q14533 505 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 PPP2R5EQ16537 467 aa23.24■■□□□ 1.31
SNX22-205ENST00000560945 MAGOHBQ96A72 148 aaKnown RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 PGAP3Q96FM1 320 aaPredicted RBP23.24■■□□□ 1.31
SNX22-205ENST00000560945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNX22-205ENST00000560945 GOLGA6L10A0A0M3HER8 536 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 IGLV3-25P01717 112 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 CLUL1Q15846 466 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 CYP1B1Q16678 543 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 PPP6R3Q5H9R7 873 aaPredicted RBP23.23■■□□□ 1.31
SNX22-205ENST00000560945 BEND5Q7L4P6 421 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 RFX6Q8HWS3 928 aa23.23■■□□□ 1.31
SNX22-205ENST00000560945 KLHL5Q96PQ7 755 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms