RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NME7Q9Y5B8 376 aa11.1□□□□□ -0.63
CDC42BPB-207ENST00000560492 ANKRD11Q6UB99 2663 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 A0A1W2PQF6 199 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 TAF4O00268 1085 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 CD2BP2O95400 341 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 TRIM21P19474 475 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 DGKGP49619 791 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 CDH8P55286 799 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 SLC14A1Q13336 389 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 ZNF667Q5HYK9 610 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 ADAMTS14Q8WXS8 1223 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 SNX19Q92543 992 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 WBP2Q969T9 261 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 GPR174Q9BXC1 333 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 LRRC27Q9C0I9 530 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 TLR8Q9NR97 1041 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 PLK2Q9NYY3 685 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 WDR35Q9P2L0 1181 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 GPSM3Q9Y4H4 160 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 FASNP49327 2511 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 FREM2Q5SZK8 3169 aa11.09□□□□□ -0.63
CDC42BPB-207ENST00000560492 TMEM131Q92545 1883 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 A0A1B0GTW7 788 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 WASH3PC4AMC7 463 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 PRRT4C9JH25 899 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ACADMP11310 421 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 NCAM1P13591 858 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 CCDC130P13994 396 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 PDCP20941 246 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ADORA2BP29275 332 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 CD6P30203 668 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ATP5C1P36542 298 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 TUBP50607 506 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 MAP3K7CLP57077 242 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ARID5AQ03989 594 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 CYP24A1Q07973 514 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ORC1Q13415 861 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 PSMD6Q15008 389 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ACOT1Q86TX2 421 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 XXYLT1Q8NBI6 393 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ELMO3Q96BJ8 720 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 TOE1Q96GM8 510 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 MRGPRX1Q96LB2 322 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 FBXO44Q9H4M3 255 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 GAREM1Q9H706 876 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 PRDM16Q9HAZ2 1276 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 AGPAT3Q9NRZ7 376 aa11.08□□□□□ -0.64
CDC42BPB-207ENST00000560492 TP53BP1Q12888 1972 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 A0A087X0B3 334 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 CACNG3O60359 315 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 SYNCRIPO60506 623 aaKnown RBP11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 EXOC3O60645 756 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 KIF20AO95235 890 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 CER1O95813 267 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 TBX18O95935 607 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 ATICP31939 592 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 MATKP42679 507 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 CASP4P49662 377 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 AMPD3Q01432 767 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 STK38Q15208 465 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 C10orf120Q5SQS8 335 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM124AQ86V42 546 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 RHBDD1Q8TEB9 315 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 UCMAQ8WVF2 138 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 DHX58Q96C10 678 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZNF419Q96HQ0 510 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM49BQ9NUQ9 324 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 NUDT5Q9UKK9 219 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 HCN2Q9UL51 889 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 RAXQ9Y2V3 346 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 STON1Q9Y6Q2 735 aa11.07□□□□□ -0.64
CDC42BPB-207ENST00000560492 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM221BA6H8Z2 402 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 MDM4O15151 490 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 HMBSP08397 361 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM200BP0CF97 657 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 P4HA1P13674 534 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 FUT11Q495W5 492 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 SOWAHCQ53LP3 525 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 DCAF12L1Q5VU92 463 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 HTR3DQ70Z44 454 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 SLC2A14Q8TDB8 520 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 PRCCQ92733 491 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 SIPA1Q96FS4 1042 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 GABRG3Q99928 467 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms