RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TUBBP07437 444 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 CNPP09543 421 aaKnown RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 RARAP10276 462 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 RALAP11233 206 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ATF6P18850 670 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 DNAJB2P25686 324 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 IL1R2P27930 398 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 GJC1P36383 396 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF135P52742 658 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF211Q13398 564 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 NNTQ13423 1086 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 DPYSL2Q16555 572 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TAZQ16635 292 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ARL13BQ3SXY8 428 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ATP13A4Q4VNC1 1196 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SNX30Q5VWJ9 437 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 MSANTD2Q6P1R3 559 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SPOCD1Q6ZMY3 1216 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC149Q6ZUS6 474 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 CYP4V2Q6ZWL3 525 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TADA2BQ86TJ2 420 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ITIH5Q86UX2 942 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TTC9BQ8N6N2 239 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 KCTD6Q8NC69 237 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 RNF139Q8WU17 664 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 POF1BQ8WVV4 589 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 NDRG1Q92597 394 aaKnown RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 FBXO32Q969P5 355 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 NTAN1Q96AB6 310 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 MYRFLQ96LU7 910 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 RUNDC3BQ96NL0 473 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TGS1Q96RS0 853 aaKnown RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 GDF15Q99988 308 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 OSBPL8Q9BZF1 889 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 ENTPD7Q9NQZ7 604 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 UXTQ9UBK9 157 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-209ENST00000560463 NAALADL1Q9UQQ1 740 aa8.97□□□□□ -0.97
TRAF3-209ENST00000560463 CHD7Q9P2D1 2997 aa8.96□□□□□ -0.97
TRAF3-209ENST00000560463 hCG_1818297A0A087WSY0 165 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 UQCRHLA0A096LP55 91 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 A0A1W2PQH9 124 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 LRRD1A4D1F6 860 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 C3orf70A6NLC5 250 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 H3BNC9 293 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 PRRG1O14668 218 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 IGLV3-25P01717 112 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 UQCRHP07919 91 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ZDHHC11BP0C7U3 371 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 KLRC2P26717 231 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CHRNA3P32297 505 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 BMP8BP34820 402 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CA8P35219 290 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CDKN2BP42772 138 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CXCR3P49682 368 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 GPR15P49685 360 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ARSEP51690 589 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 EPHB3P54753 998 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CDH6P55285 790 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ERVFC1P60507 584 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ERVK-21P61565 698 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 USP46P62068 366 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SCAPQ12770 1279 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 IFRD2Q12894 506 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 MTA1Q13330 715 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 KLF1Q13351 362 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 EIF4EBP2Q13542 120 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TFDP2Q14188 446 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 RAB30Q15771 203 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TAF12Q16514 161 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CYP1B1Q16678 543 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 KCNT1Q5JUK3 1230 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 BRMS1LQ5PSV4 323 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ACBD5Q5T8D3 534 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SDHAF4Q5VUM1 108 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 OTUD1Q5VV17 481 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TXNRD3NBQ6F5E7 133 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 LILRA6Q6PI73 481 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 MFSD7Q6UXD7 560 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SCD5Q86SK9 330 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TNS4Q8IZW8 715 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 MRPL43Q8N983 215 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 C12orf50Q8NA57 414 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 CCDC26Q8TAB7 109 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 AUTS2Q8WXX7 1259 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 HSPH1Q92598 858 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 EDEM1Q92611 657 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 RUBCNQ92622 972 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SERPINB11Q96P15 392 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms