RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 RAB3IL1Q8TBN0 382 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 DDI1Q8WTU0 396 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 PSPC1Q8WXF1 523 aaKnown RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 KRT35Q92764 455 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 APBB2Q92870 758 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 WNT8BQ93098 351 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 MPHOSPH6Q99547 160 aaKnown RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 TMEM47Q9BQJ4 181 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 DCLK3Q9C098 648 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 INTS2Q9H0H0 1204 aaKnown RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 PCDH18Q9HCL0 1135 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 CACNA2D2Q9NY47 1150 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 PSMC3IPQ9P2W1 217 aaPredicted RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 ABCF2Q9UG63 623 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 PAIP2BQ9ULR5 123 aaKnown RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 DMTF1Q9Y222 760 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 SH3GLB1Q9Y371 365 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 NEU2Q9Y3R4 380 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF831Q5JPB2 1677 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 TAF1LQ8IZX4 1826 aa6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 COL5A2P05997 1499 aaPredicted RBP6.22□□□□□ -1.41
SNRPA1-209ENST00000560307 ATRNL1Q5VV63 1379 aa6.21□□□□□ -1.41
SNRPA1-209ENST00000560307 A0A0J9YVX5 310 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 EXOC1LA0A1B0GW35 172 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC162PA2VCL2 907 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 EIF4E1BA6NMX2 242 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TNFRSF10CO14798 259 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CASQ2O14958 399 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PLSCR1O15162 318 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 BUD23O43709 281 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SPOPO43791 374 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 EDIL3O43854 480 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 LILRB5O75023 590 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TDP2O95551 362 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TP53P04637 393 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PDGFRBP09619 1106 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 UBTFL6P0CB48 400 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PYGMP11217 842 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CETPP11597 493 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 FSTP19883 344 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ABCB4P21439 1286 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CA4P22748 312 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 GCAP28676 217 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 L1CAMP32004 1257 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PHBP35232 272 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 COPB2P35606 906 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PGM1P36871 562 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MAGEA4P43358 317 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 RPL5P46777 297 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CHN2P52757 468 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SESN3P58005 492 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 GSTO1P78417 241 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MYL7Q01449 175 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CETN1Q12798 172 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SF3A3Q12874 501 aaKnown RBP eCLIP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 DCTN2Q13561 401 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 THOC5Q13769 683 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SF3B3Q15393 1217 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 GRIK5Q16478 980 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 KLHL38Q2WGJ6 581 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 USP41Q3LFD5 358 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ANKRD20A4Q4UJ75 823 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PPM1JQ5JR12 505 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TCERG1LQ5VWI1 586 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 IZUMO3Q5VZ72 239 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ARMC3Q5W041 872 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PPP1R2P3Q6NXS1 205 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PRR23CQ6ZRP0 262 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ADAT2Q7Z6V5 191 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MTDHQ86UE4 582 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 LRRC6Q86X45 466 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SCUBE1Q8IWY4 988 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 NUP93Q8N1F7 819 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MARVELD2Q8N4S9 558 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 CATSPER1Q8NEC5 780 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF564Q8TBZ8 553 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF384Q8TF68 577 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 FAM172AQ8WUF8 416 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 WDR60Q8WVS4 1066 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 HAS1Q92839 578 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF669Q96BR6 464 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PRICKLE1Q96MT3 831 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ORAI2Q96SN7 254 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SIKE1Q9BRV8 207 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 FGFBP2Q9BYJ0 223 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MRPS26Q9BYN8 205 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 Q9H521 79 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 STN1Q9H668 368 aaKnown RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 KIAA1586Q9HCI6 787 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 MLXIPLQ9NP71 852 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 HOMER2Q9NSB8 354 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ARL8BQ9NVJ2 186 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 DMAC2Q9NW81 257 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 KCNK4Q9NYG8 393 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms