RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 TYRP14679 529 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 KCNA4P22459 653 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 NTSR1P30989 418 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 P2RY2P41231 377 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 PRCPP42785 496 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 PGFP49763 221 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 COG7P83436 770 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 LRRC63Q05C16 580 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 STIM1Q13586 685 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
SPG11-219ENST00000559822 EMC10Q5UCC4 262 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 ARHGAP17Q68EM7 881 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 SFTPA1Q8IWL2 248 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 FMR1NBQ8N0W7 255 aaPredicted RBP12.9□□□□□ -0.34
SPG11-219ENST00000559822 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 SMARCE1Q969G3 411 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 WBP2Q969T9 261 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 EDEM2Q9BV94 578 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 UBXN6Q9BZV1 441 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 DCLK3Q9C098 648 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 NMUR1Q9HB89 426 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 STRIP2Q9ULQ0 834 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 INVSQ9Y283 1065 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 USP3Q9Y6I4 520 aa12.9□□□□□ -0.34
SPG11-219ENST00000559822 GREM1O60565 184 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
SPG11-219ENST00000559822 HOXB2P14652 356 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPG11-219ENST00000559822 CHKAP35790 457 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 PPP1R2P41236 205 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 DHPSP49366 369 aaPredicted RBP12.89□□□□□ -0.35
SPG11-219ENST00000559822 RAD23BP54727 409 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 E2F5Q15329 346 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 TPGS1Q6ZTW0 290 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 CHPFQ8IZ52 775 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 ANKRD52Q8NB46 1076 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 SLC4A11Q8NBS3 891 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 SEMA4DQ92854 862 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 TIGD1Q96MW7 591 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 SMOC1Q9H4F8 434 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 METTL14Q9HCE5 456 aaKnown RBP12.89□□□□□ -0.35
SPG11-219ENST00000559822 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 HESX1Q9UBX0 185 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 ARMCX3Q9UH62 379 aaPredicted RBP12.89□□□□□ -0.35
SPG11-219ENST00000559822 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 THADAQ6YHU6 1953 aa12.89□□□□□ -0.35
SPG11-219ENST00000559822 PSMA7O14818 248 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 TM4SF5O14894 197 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 MDM4O15151 490 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 STC2O76061 302 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 BCKDHBP21953 392 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
SPG11-219ENST00000559822 DGKGP49619 791 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 BCAT1P54687 386 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 CUL2Q13617 745 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 TCEAL6Q6IPX3 200 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 SLC36A4Q6YBV0 504 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 Q6ZNB5 142 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 RSRC2Q7L4I2 434 aaKnown RBP12.88□□□□□ -0.35
SPG11-219ENST00000559822 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 PIGZQ86VD9 579 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 MIB1Q86YT6 1006 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
SPG11-219ENST00000559822 TCEAL3Q969E4 200 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 TMEM9BQ9NQ34 198 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
SPG11-219ENST00000559822 RASAL2Q9UJF2 1139 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 NUP205Q92621 2012 aa12.88□□□□□ -0.35
SPG11-219ENST00000559822 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 GFRA2O00451 464 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
SPG11-219ENST00000559822 NPC1O15118 1278 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 AP5Z1O43299 807 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 ZNF217O75362 1048 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 CYBBP04839 570 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 HOXD12P35452 270 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 CETN1Q12798 172 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 EFEMP1Q12805 493 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 LMAN2Q12907 356 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 RAB41Q5JT25 222 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 ABCA7Q8IZY2 2146 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 PIGKQ92643 395 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 TATDN2Q93075 761 aa12.87□□□□□ -0.35
SPG11-219ENST00000559822 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms