RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 RANBP10Q6VN20 620 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 FSTL5Q8N475 847 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 CCDC33Q8N5R6 958 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 MAP4K1Q92918 833 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 SPRTNQ9H040 489 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 VPS45Q9NRW7 570 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 FZD4Q9ULV1 537 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 E5RJQ4 531 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 FYB1O15117 783 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 TMEM225BP0DP42 221 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 ITGB6P18564 788 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 Q4G0T1 1027 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 AASDHQ4L235 1098 aaPredicted RBP4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 TMTC4Q5T4D3 741 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 ABLIM2Q6H8Q1 611 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 KIAA0408Q6ZU52 694 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 VPS50Q96JG6 964 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 HS6ST2Q96MM7 605 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 WDR24Q96S15 920 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 COLEC11Q9BWP8 271 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 SAP30LQ9HAJ7 183 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZBTB26Q9HCK0 441 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 SEMA5BQ9P283 1151 aa4.85□□□□□ -1.63
CTDSPL2-207ENST00000559738 FNDC1Q4ZHG4 1894 aaPredicted RBP4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 MOSPD3O75425 235 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 MST1P26927 711 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 GALNSP34059 522 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 PTGER1P34995 402 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 GNALP38405 381 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 PBX1P40424 430 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 TXNL4AP83876 142 aaKnown RBP4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 DNASE1L3Q13609 305 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 TMEM63BQ5T3F8 832 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 RAP1GAP2Q684P5 730 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 NGDNQ8NEJ9 315 aaKnown RBP4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 PJA1Q8NG27 643 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 DENND1AQ8TEH3 1009 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 IGFBPL1Q8WX77 278 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 GDF15Q99988 308 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 FAM118BQ9BPY3 351 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZCWPW1Q9H0M4 648 aa4.84□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZNF521Q96K83 1311 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 ADAM10O14672 748 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 APOL1O14791 398 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 DSCR3O14972 297 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 NCK2O43639 380 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 NDST3O95803 873 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 MYL3P08590 195 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 HMGB1P09429 215 aaKnown RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 TMIGD3P0DMS9 266 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 HOXD9P28356 352 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 GABRB3P28472 473 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 GPS1Q13098 491 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 PMS2P11Q13670 270 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 HIBCHQ6NVY1 386 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 VSTM1Q6UX27 236 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 CCDC28AQ8IWP9 274 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 ZNF48Q96MX3 618 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 FCRL4Q96PJ5 515 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 MAGEB5Q9BZ81 275 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 VPS16Q9H269 839 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 TMEM8AQ9HCN3 771 aa4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 TUBA8Q9NY65 449 aaPredicted RBP4.83□□□□□ -1.64
CTDSPL2-207ENST00000559738 C16orf96A6NNT2 1141 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 PPEF2O14830 753 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 COQ9O75208 318 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 BMP15O95972 392 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 HARSP12081 509 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 MYL4P12829 197 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 MMP13P45452 471 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 YPEL5P62699 121 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 RAE1P78406 368 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 CCDC15Q0P6D6 951 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 IFIT5Q13325 482 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 KCNJ12Q14500 433 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 TRIP6Q15654 476 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 MRNIPQ6NTE8 343 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 BEND5Q7L4P6 421 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 P3H2Q8IVL5 708 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 CCAR1Q8IX12 1150 aaKnown RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 ABHD5Q8WTS1 349 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 PCDHAC1Q9H158 963 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 STARD7Q9NQZ5 370 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 ELOVL5Q9NYP7 299 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 ZMYND8Q9ULU4 1186 aaPredicted RBP4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 MAN2B2Q9Y2E5 1009 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 PCDHB2Q9Y5E7 798 aa4.82□□□□□ -1.64
CTDSPL2-207ENST00000559738 RNF8O76064 485 aa4.81□□□□□ -1.64
CTDSPL2-207ENST00000559738 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms