RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NDRG1Q92597 394 aaKnown RBP17.3■□□□□ 0.36
TPM1-219ENST00000559397 ZNF512Q96ME7 567 aaPredicted RBP17.3■□□□□ 0.36
TPM1-219ENST00000559397 PARD6BQ9BYG5 372 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 MIS12Q9H081 205 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 FBXO44Q9H4M3 255 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 SYNCQ9H7C4 482 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 ZNF334Q9HCZ1 680 aaPredicted RBP17.3■□□□□ 0.36
TPM1-219ENST00000559397 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
TPM1-219ENST00000559397 CLDND1Q9NY35 253 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 MYO16Q9Y6X6 1858 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 DOCK6Q96HP0 2047 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 NOTCH4Q99466 2003 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 FBXO21O94952 628 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 ZBED1O96006 694 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 SNX16P57768 344 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 DAOAP59103 153 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 IFRD2Q12894 506 aaPredicted RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 TAF10Q12962 218 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 TMC5Q6UXY8 1006 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 PIWIL1Q96J94 861 aaKnown RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 HCFC1R1Q9NWW0 138 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 DNMT3BQ9UBC3 853 aaKnown RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 RAB21Q9UL25 225 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 MAGED2Q9UNF1 606 aaPredicted RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 TARSL2A2RTX5 802 aaKnown RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 XYLBO75191 536 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 TUBBP07437 444 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 HOXB8P17481 243 aaPredicted RBP17.29■□□□□ 0.36
TPM1-219ENST00000559397 EPHA5P54756 1037 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 ZNF252P-AS1Q0IIN9 211 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 CLUL1Q15846 466 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 FBXO38Q6PIJ6 1188 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 OLFML1Q6UWY5 402 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 ZDHHC17Q8IUH5 632 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 FNIP1Q8TF40 1166 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 MCEEQ96PE7 176 aa17.29■□□□□ 0.36
TPM1-219ENST00000559397 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 PTPN2P17706 415 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 PGFP49763 221 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 RWDD2BP57060 319 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 RNASE9P60153 205 aaKnown RBP17.28■□□□□ 0.36
TPM1-219ENST00000559397 SLC6A3Q01959 620 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 OGDHQ02218 1023 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 TAF12Q16514 161 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 RARS2Q5T160 578 aaKnown RBP17.28■□□□□ 0.36
TPM1-219ENST00000559397 OR6B2Q6IFH4 312 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 GPR149Q86SP6 731 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 TMEM150AQ86TG1 271 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 IRGQQ8WZA9 623 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 KHSRPQ92945 711 aaKnown RBP eCLIP17.28■□□□□ 0.364e-9■□□□□ 9.5
TPM1-219ENST00000559397 FBXO32Q969P5 355 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 MSLNLQ96KJ4 702 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 PNKPQ96T60 521 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 CORO1BQ9BR76 489 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 S1PR5Q9H228 398 aa17.28■□□□□ 0.36
TPM1-219ENST00000559397 UXTQ9UBK9 157 aaPredicted RBP17.28■□□□□ 0.36
TPM1-219ENST00000559397 OBSL1O75147 1896 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 YJEFN3A6XGL0 299 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 E7ENQ6 273 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 PSTPIP1O43586 416 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 F11P03951 625 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 KRT3P12035 628 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 RFC1P35251 1148 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 ZNF211Q13398 564 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 PIGHQ14442 188 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 TAF5Q15542 800 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 GRASPQ7Z6J2 395 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 SCD5Q86SK9 330 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 OVCA2Q8WZ82 227 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 SMG7Q92540 1137 aaKnown RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 NAP1L3Q99457 506 aaPredicted RBP17.27■□□□□ 0.36
TPM1-219ENST00000559397 NMUR1Q9HB89 426 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 ASAH2Q9NR71 780 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 GMIPQ9P107 970 aa17.27■□□□□ 0.36
TPM1-219ENST00000559397 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 CCDC188H7C350 402 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 NRG2O14511 850 aaPredicted RBP17.26■□□□□ 0.35
TPM1-219ENST00000559397 FGGP02679 453 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 RHOP08100 348 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 PYGMP11217 842 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 SCNN1AP37088 669 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 TAS2R40P59535 323 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 SNX30Q5VWJ9 437 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 WDR93Q6P2C0 686 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms