RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 CCNI2Q6ZMN8 369 aaPredicted RBP11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 SV2AQ7L0J3 742 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 SMYD4Q8IYR2 804 aaPredicted RBP11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 DEFB119Q8N690 84 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 PNPLA1Q8N8W4 532 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 CCDC150Q8NCX0 1101 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 TAF4BQ92750 862 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 TSG101Q99816 390 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 MED10Q9BTT4 135 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 ZNF518BQ9C0D4 1074 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 BCCIPQ9P287 314 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 HCN2Q9UL51 889 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 NME7Q9Y5B8 376 aa11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 FLNBO75369 2602 aaKnown RBP11.88□□□□□ -0.51
CHRNA3-205ENST00000559080 BPTFQ12830 3046 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 SCAMP3O14828 347 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 SH3BP5O60239 455 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ZIC2O95409 532 aaPredicted RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ASS1P00966 412 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 HLA-DRAP01903 254 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 APODP05090 189 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 FTH1P19P0C7X4 201 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 EPB41P11171 864 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 GABRG2P18507 467 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 CDH8P55286 799 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 RPL6Q02878 288 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ENPEPQ07075 957 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 BYSLQ13895 437 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 TRIP6Q15654 476 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 EDRF1Q3B7T1 1238 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ZCWPW2Q504Y3 356 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ZNF658Q5TYW1 1059 aaPredicted RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 MDM1Q8TC05 714 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 C8orf48Q96LL4 319 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 GSDMAQ96QA5 445 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 CCDC86Q9H6F5 360 aaKnown RBP11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 MMRN2Q9H8L6 949 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 CD248Q9HCU0 757 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 TRPM5Q9NZQ8 1165 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
CHRNA3-205ENST00000559080 MYLKQ15746 1914 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 ZNF840PA6NDX5 716 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 CETN3O15182 167 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 OAS1P00973 400 aaKnown RBP11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 GRIA2P42262 883 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 TNFRSF4P43489 277 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 GCLMP48507 274 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 SLC14A1Q13336 389 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 STIM1Q13586 685 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 SLC36A4Q6YBV0 504 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 FAM35AQ86V20 835 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 ENGASEQ8NFI3 743 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 HNRNPLLQ8WVV9 542 aaKnown RBP11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 SMARCD1Q96GM5 515 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 TIGD1Q96MW7 591 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 TTLL2Q9BWV7 592 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 B3GNT5Q9BYG0 378 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 TMEM8AQ9HCN3 771 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 CPQQ9Y646 472 aa11.86□□□□□ -0.51
CHRNA3-205ENST00000559080 A0A1W2PQF6 199 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 CLDN5O00501 218 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 STX10O60499 249 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 CBFA2T3O75081 653 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 ADH5P11766 374 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 PRCPP42785 496 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 ASPAP45381 313 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 PPP3CCP48454 512 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 MXI1P50539 228 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 NDST1P52848 882 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 KDSRQ06136 332 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 LY6G5CQ5SRR4 150 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 RABEPKQ7Z6M1 372 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 ACOT1Q86TX2 421 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 SLCO6A1Q86UG4 719 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 UNC93AQ86WB7 457 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 MIB1Q86YT6 1006 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 TAS1R2Q8TE23 839 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms