RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 TLL1O43897 1013 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 APOC2P02655 101 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 PAX3P23760 479 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 MATKP42679 507 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 BCAR1P56945 870 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 TERF2Q15554 542 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 CHD9Q3L8U1 2897 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 BOLA3Q53S33 107 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 EFHC1Q5JVL4 640 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 RASIP1Q5U651 963 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-207ENST00000558763 LRIG3Q6UXM1 1119 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 TMEM173Q86WV6 379 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-207ENST00000558763 VSIG1Q86XK7 387 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 CMTR2Q8IYT2 770 aaKnown RBP13.5□□□□□ -0.25
SMAD3-207ENST00000558763 DEFB106AQ8N104 65 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 PQLC3Q8N755 202 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 MED10Q9BTT4 135 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 MAGEB5Q9BZ81 275 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 ADAM7Q9H2U9 754 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 CWH43Q9H720 699 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 VPS18Q9P253 973 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 ATP8A1Q9Y2Q0 1164 aa13.5□□□□□ -0.25
SMAD3-207ENST00000558763 GRXCR1A8MXD5 290 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ETS1P14921 441 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ITIH2P19823 946 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 TYMPP19971 482 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CHKAP35790 457 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 VPS41P49754 854 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ITGA8P53708 1063 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 GDF10P55107 478 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 DAOAP59103 153 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 HTRA4P83105 476 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ZNF844Q08AG5 666 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 DPYSL2Q16555 572 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ODF2Q5BJF6 829 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 STRADAQ7RTN6 431 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CCDC185Q8N715 623 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 PHOSPHO2Q8TCD6 241 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 RNF157Q96PX1 679 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 NPY6RQ99463 290 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 GDF15Q99988 308 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 TMEM121Q9BTD3 319 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CALN1Q9BXU9 219 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMAD3-207ENST00000558763 INSL6Q9Y581 213 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 KIAA1671Q9BY89 1806 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CHD7Q9P2D1 2997 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 LCHNA4D1U4 455 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ZNF487B1APH4 448 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ALDH2P05091 517 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 GALTP07902 379 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ATF2P15336 505 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ALDH7A1P49419 539 aaKnown RBP13.49□□□□□ -0.25
SMAD3-207ENST00000558763 TKTL1P51854 596 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 PDK2Q15119 407 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 SLC25A52Q3SY17 297 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 SYPL2Q5VXT5 272 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 TMEM175Q9BSA9 504 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 FRMD8P1Q9BZ68 369 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-207ENST00000558763 ULBP1Q9BZM6 244 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 C10orf88Q9H8K7 445 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 MARCH5Q9NX47 278 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 DSEQ9UL01 958 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 USP3Q9Y6I4 520 aa13.49□□□□□ -0.25
SMAD3-207ENST00000558763 CDH23Q9H251 3354 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 YJEFN3A6XGL0 299 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 E7ENQ6 273 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 TADA2AO75478 443 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 NUDT17P0C025 328 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 L1CAMP32004 1257 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 PMS2P54278 862 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 SLC8A3P57103 927 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 YWHAZP63104 245 aaKnown RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 LMNB2Q03252 620 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 NOMO1Q15155 1222 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 OVOS1Q6IE37 1185 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 HIBCHQ6NVY1 386 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 RFX6Q8HWS3 928 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 BCL7CQ8WUZ0 217 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 RAD9AQ99638 391 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 NCAPGQ9BPX3 1015 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 ZNF670Q9BS34 389 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 SEMA4AQ9H3S1 761 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms