RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 STARD3Q14849 445 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 IL17AQ16552 155 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 SOWAHAQ2M3V2 549 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 KDM7AQ6ZMT4 941 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMAD3-206ENST00000558739 EID2Q8N6I1 236 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 IGSF22Q8N9C0 903 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 BIRC7Q96CA5 298 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 SIPA1Q96FS4 1042 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 ASB7Q9H672 318 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PDRG1Q9NUG6 133 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 KCNK4Q9NYG8 393 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PLK2Q9NYY3 685 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
SMAD3-206ENST00000558739 A0A1B0GTQ1 180 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 KLK10O43240 276 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 PAPSS1O43252 624 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 MYF5P13349 255 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 PRKCHP24723 683 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 ANXA13P27216 316 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 SLC12A3P55017 1021 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 INSM1Q01101 510 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 VAC14Q08AM6 782 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 TEAD4Q15561 434 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 INAVAQ3KP66 663 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 DCBLD1Q8N8Z6 715 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 NSUN7Q8NE18 718 aaKnown RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 SNRNP27Q8WVK2 155 aaKnown RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 WASF1Q92558 559 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-206ENST00000558739 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 CLCA2Q9UQC9 943 aa12.61□□□□□ -0.39
SMAD3-206ENST00000558739 GFRA2O00451 464 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 FSBPO95073 299 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 PCSK1P29120 753 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 OXTRP30559 389 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 DGKGP49619 791 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 BROXQ5VW32 411 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 HIST2H2BCQ6DN03 193 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 DHX40Q8IX18 779 aaKnown RBP12.6□□□□□ -0.39
SMAD3-206ENST00000558739 SAP25Q8TEE9 199 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 KCNE4Q8WWG9 221 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-206ENST00000558739 SLC6A18Q96N87 628 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
SMAD3-206ENST00000558739 PRRC2CQ9Y520 2896 aaKnown RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 CLDN5O00501 218 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 LAD1O00515 517 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 WNT1P04628 370 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 PDGFRBP09619 1106 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 C1SP09871 688 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 GP1BBP13224 206 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 PNPLA4P41247 253 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 UCNP55089 124 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 ENPP2Q13822 863 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 KCNN1Q92952 543 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 FIZ1Q96SL8 496 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 REEP2Q9BRK0 252 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 TIPINQ9BVW5 301 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 GDAP2Q9NXN4 497 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 HEMK1Q9Y5R4 338 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-206ENST00000558739 CACNA1DQ01668 2161 aa12.59□□□□□ -0.39
SMAD3-206ENST00000558739 TSPAN3O60637 253 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 TBX18O95935 607 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 ITGAVP06756 1048 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 KRT19P08727 400 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 ACADMP11310 421 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 ABCB4P21439 1286 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 PPP3CCP48454 512 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 LHX1P48742 406 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 GABREP78334 506 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 TDRD10Q5VZ19 366 aaKnown RBP12.58□□□□□ -0.4
SMAD3-206ENST00000558739 TOP6BLQ8N6T0 577 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
SMAD3-206ENST00000558739 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-206ENST00000558739 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms