RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PHTF2Q8N3S3 785 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 DCLK2Q8N568 766 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 MLKLQ8NB16 471 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 RPLP0P6Q8NHW5 317 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 UBA3Q8TBC4 463 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 USP33Q8TEY7 942 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 NDRG1Q92597 394 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 RUBCNQ92622 972 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 NACA2Q9H009 215 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 INTS2Q9H0H0 1204 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
SNRPA1-206ENST00000558059 LAMA1P25391 3075 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 STC2O76061 302 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 ZBED1O96006 694 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 ADH1CP00326 375 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 RALAP11233 206 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 ADH5P11766 374 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 EIF2DP41214 584 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 PXNP49023 591 aaPredicted RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SLC8A3P57103 927 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 GAD2Q05329 585 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 BST2Q10589 180 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SRSF5Q13243 272 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 DSG2Q14126 1118 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 CNGA2Q16280 664 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 Q6ZNB5 142 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SYT13Q7L8C5 426 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 WDR5BQ86VZ2 330 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SLC35F5Q8WV83 523 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 KCTD13Q8WZ19 329 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 CNOT6LQ96LI5 555 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 PNKPQ96T60 521 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 CRACR2AQ9BSW2 395 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 ULBP1Q9BZM6 244 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SPHK2Q9NRA0 654 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 HESX1Q9UBX0 185 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SMG5Q9UPR3 1016 aaKnown RBP9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SLC8A2Q9UPR5 921 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 CNTN6Q9UQ52 1028 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 SPTBN2O15020 2390 aa9.22□□□□□ -0.93
SNRPA1-206ENST00000558059 THADAQ6YHU6 1953 aa9.21□□□□□ -0.93
SNRPA1-206ENST00000558059 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.93
SNRPA1-206ENST00000558059 CCDC163A0A0D9SF12 145 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 KAT7O95251 611 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 KLKB1P03952 638 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 APODP05090 189 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 SETSIPP0DME0 302 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 CNR2P34972 360 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 GRIA2P42262 883 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 PI4KAP42356 2102 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 SEC13P55735 322 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 YWHAGP61981 247 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 ADIGQ0VDE8 80 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 EFEMP1Q12805 493 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 STILQ15468 1287 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 DPCR1Q3MIW9 517 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 C2orf27AQ580R0 203 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 EMC10Q5UCC4 262 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 PMF1Q6P1K2 205 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 TADA2BQ86TJ2 420 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 MIB1Q86YT6 1006 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 SCML4Q8N228 414 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 ARHGAP18Q8N392 663 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 CAMKK1Q8N5S9 505 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 NAT16Q8N8M0 369 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 RBBP8NLQ8NC74 664 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 CCDC26Q8TAB7 109 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 P2RY11Q96G91 374 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 HHIPQ96QV1 700 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 CDK5RAP1Q96SZ6 601 aaKnown RBP9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 NUP62CLQ9H1M0 184 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 LRRC4Q9HBW1 653 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 UBE2TQ9NPD8 197 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 ARHGEF4Q9NR80 690 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 MARCH2Q9P0N8 246 aa9.21□□□□□ -0.94
SNRPA1-206ENST00000558059 CACNA1AO00555 2505 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 YJEFN3A6XGL0 299 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 E7ENQ6 273 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 TRIM24O15164 1050 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 TULP3O75386 442 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 HMBSP08397 361 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 HNRNPLP14866 589 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 SLC9A1P19634 815 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 TGM1P22735 817 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 TNFRSF4P43489 277 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 KIR2DL1P43626 348 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 RGS7P49802 495 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 DAOAP59103 153 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 MRPS21P82921 87 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 COG7P83436 770 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 APBA1Q02410 837 aa9.2□□□□□ -0.94
SNRPA1-206ENST00000558059 KDSRQ06136 332 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms