RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 STRIP2Q9ULQ0 834 aa26.73■■□□□ 1.87
SMAD6-202ENST00000557916 PI4K2BG5E9Z4 385 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 CAPN9O14815 690 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 GLI1P08151 1106 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 NCAM1P13591 858 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 HNRNPH3P31942 346 aaKnown RBP26.72■■□□□ 1.87
SMAD6-202ENST00000557916 GOLGA8FQ08AF8 430 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 GOLGA8DPQ0D2H9 430 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 BEND5Q7L4P6 421 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 EDAQ92838 391 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 DNAJC7Q99615 494 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 C11orf70Q9BRQ4 267 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 NAALADL1Q9UQQ1 740 aa26.72■■□□□ 1.87
SMAD6-202ENST00000557916 MFAP3LO75121 409 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 GRAP2O75791 330 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 IRF1P10914 325 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 ADKP55263 362 aaKnown RBP26.71■■□□□ 1.87
SMAD6-202ENST00000557916 PFKPQ01813 784 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 TSR1Q2NL82 804 aaKnown RBP26.71■■□□□ 1.87
SMAD6-202ENST00000557916 SLC26A9Q7LBE3 791 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 PHF13Q86YI8 300 aaPredicted RBP26.71■■□□□ 1.87
SMAD6-202ENST00000557916 ADAM22Q9P0K1 906 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 SFMBT1Q9UHJ3 866 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 SH3BP1Q9Y3L3 701 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 MUC3AQ02505 3323 aa26.71■■□□□ 1.87
SMAD6-202ENST00000557916 SLC12A8A0AV02 714 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 AKR1B15C9JRZ8 316 aaPredicted RBP26.7■■□□□ 1.86
SMAD6-202ENST00000557916 HSF2BPO75031 334 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 COG7P83436 770 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 ARID5BQ14865 1188 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 ACAD10Q6JQN1 1059 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 MSANTD2Q6P1R3 559 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 VPS36Q86VN1 386 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 CNGA4Q8IV77 575 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 ASIC4Q96FT7 647 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 FAM83CQ9BQN1 747 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 ABHD10Q9NUJ1 306 aa26.7■■□□□ 1.86
SMAD6-202ENST00000557916 ZNHIT6Q9NWK9 470 aaKnown RBP26.7■■□□□ 1.86
SMAD6-202ENST00000557916 DUS2Q9NX74 493 aaKnown RBP26.7■■□□□ 1.86
SMAD6-202ENST00000557916 HELZP42694 1942 aaKnown RBP26.7■■□□□ 1.86
SMAD6-202ENST00000557916 E2F8A0AVK6 867 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 GOLGA8SH3BPF8 625 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 DDX3XO00571 662 aaKnown RBP eCLIP26.69■■□□□ 1.86
SMAD6-202ENST00000557916 PLEKP08567 350 aaPredicted RBP26.69■■□□□ 1.86
SMAD6-202ENST00000557916 SCNN1AP37088 669 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 FAM102AQ5T9C2 384 aaPredicted RBP26.69■■□□□ 1.86
SMAD6-202ENST00000557916 SYPL2Q5VXT5 272 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 DRC7Q8IY82 874 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 KIAA1958Q8N8K9 716 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 OSCP1Q8WVF1 389 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 DNASE1L2Q92874 299 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 WBP2Q969T9 261 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.69■■□□□ 1.86
SMAD6-202ENST00000557916 TAS2R14Q9NYV8 317 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 FBXL21Q9UKT6 434 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 WNT6Q9Y6F9 365 aa26.69■■□□□ 1.86
SMAD6-202ENST00000557916 TRIOO75962 3097 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 TMCO5BA8MYB1 307 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 ARNTLO00327 626 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 SCAMP3O14828 347 aaKnown RBP26.68■■□□□ 1.86
SMAD6-202ENST00000557916 CALB1P05937 261 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 HMBSP08397 361 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 SIGLEC14Q08ET2 396 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 PTP4A2Q12974 167 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 PDGFRLQ15198 375 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 DCAF6Q58WW2 860 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 PPP1R2P3Q6NXS1 205 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 WDR59Q6PJI9 974 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 DEFB106AQ8N104 65 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 DQX1Q8TE96 717 aaKnown RBP26.68■■□□□ 1.86
SMAD6-202ENST00000557916 SLC2A13Q96QE2 648 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 TRPV5Q9NQA5 729 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 ARHGAP20Q9P2F6 1191 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 WNT16Q9UBV4 365 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 ADAMTS1Q9UHI8 967 aa26.68■■□□□ 1.86
SMAD6-202ENST00000557916 LSM7Q9UK45 103 aaKnown RBP26.68■■□□□ 1.86
SMAD6-202ENST00000557916 STC2O76061 302 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 ADCY5O95622 1261 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 GZMAP12544 262 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 IFNAR2P48551 515 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 RNASE9P60153 205 aaKnown RBP26.67■■□□□ 1.86
SMAD6-202ENST00000557916 C1QBPQ07021 282 aaKnown RBP26.67■■□□□ 1.86
SMAD6-202ENST00000557916 TRIM68Q6AZZ1 485 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 HTR3DQ70Z44 454 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 MON1BQ7L1V2 547 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 PHLDB2Q86SQ0 1253 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 CSGALNACT1Q8TDX6 532 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 LINC00597Q9H2U6 94 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 WDR35Q9P2L0 1181 aa26.67■■□□□ 1.86
SMAD6-202ENST00000557916 HBS1LQ9Y450 684 aaKnown RBP26.67■■□□□ 1.86
SMAD6-202ENST00000557916 DLL1O00548 723 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 SLC9A3R1O14745 358 aaPredicted RBP26.66■■□□□ 1.86
SMAD6-202ENST00000557916 MSI1O43347 362 aaKnown RBP26.66■■□□□ 1.86
SMAD6-202ENST00000557916 DAB1O75553 588 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 TNK2Q07912 1038 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 TRIM67Q6ZTA4 783 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 MCOLN2Q8IZK6 566 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 EBF3Q9H4W6 596 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 EPHX3Q9H6B9 360 aa26.66■■□□□ 1.86
SMAD6-202ENST00000557916 TBC1D14Q9P2M4 693 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms