RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 FAM228BP0C875 321 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 IRF1P10914 325 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 GZMAP12544 262 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 RNASE9P60153 205 aaKnown RBP11.87□□□□□ -0.51
APEX1-220ENST00000557592 CDK17Q00537 523 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 PTP4A2Q12974 167 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
APEX1-220ENST00000557592 GRM2Q14416 872 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
APEX1-220ENST00000557592 GSE1Q14687 1217 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 VITQ6UXI7 678 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 SLC26A9Q7LBE3 791 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 DNAAF5Q86Y56 855 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 RNF135Q8IUD6 432 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 MCOLN2Q8IZK6 566 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 ZNF276Q8N554 614 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 SH3RF2Q8TEC5 729 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 NXPE3Q969Y0 559 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 E2F7Q96AV8 911 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 CCDC42Q96M95 316 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 PLA2G2FQ9BZM2 168 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 NHEJ1Q9H9Q4 299 aaPredicted RBP11.87□□□□□ -0.51
APEX1-220ENST00000557592 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 METTL5Q9NRN9 209 aaKnown RBP11.87□□□□□ -0.51
APEX1-220ENST00000557592 GKN1Q9NS71 199 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 MARCH2Q9P0N8 246 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 CFAP97Q9P2B7 532 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 WDR35Q9P2L0 1181 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 NAALADL1Q9UQQ1 740 aa11.87□□□□□ -0.51
APEX1-220ENST00000557592 SSU72P8A0A1W2PR75 194 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SLC12A8A0AV02 714 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 LEFTY2O00292 366 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
APEX1-220ENST00000557592 DAB1O75553 588 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 RRM1P23921 792 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SCNN1AP37088 669 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 ZXDBP98169 803 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
APEX1-220ENST00000557592 USP4Q13107 963 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 ZNF77Q15935 545 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SLC18A3Q16572 532 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 DCAF6Q58WW2 860 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 CCDC122Q5T0U0 273 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SYPL2Q5VXT5 272 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
APEX1-220ENST00000557592 BEND5Q7L4P6 421 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.51
APEX1-220ENST00000557592 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 DEFB106AQ8N104 65 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 BPIFB1Q8TDL5 484 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 DEPDC1BQ8WUY9 529 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 VCPIP1Q96JH7 1222 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
APEX1-220ENST00000557592 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
APEX1-220ENST00000557592 OBP2AQ9NY56 170 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SFMBT1Q9UHJ3 866 aa11.86□□□□□ -0.51
APEX1-220ENST00000557592 SCAMP3O14828 347 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 MSI1O43347 362 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 GJB6O95452 261 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 HMBSP08397 361 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 PSMC3P17980 439 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 ABCB4P21439 1286 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 GSCP56915 257 aaPredicted RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 TDGQ13569 410 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 MTF1Q14872 753 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 ASTE1Q2TB18 679 aaPredicted RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 MSANTD2Q6P1R3 559 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 C3orf20Q8ND61 904 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 DQX1Q8TE96 717 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.51
APEX1-220ENST00000557592 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 TRIM11Q96F44 468 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 SELENOOQ9BVL4 669 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 TRMT61BQ9BVS5 477 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 ISCUQ9H1K1 167 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 THG1LQ9NWX6 298 aaKnown RBP11.85□□□□□ -0.51
APEX1-220ENST00000557592 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 15.5
APEX1-220ENST00000557592 MUTYHQ9UIF7 546 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 SORCS3Q9UPU3 1222 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 SH3BP1Q9Y3L3 701 aa11.85□□□□□ -0.51
APEX1-220ENST00000557592 SYNJ2BP-COX16A0A087WUM0 186 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 ZNF263O14978 683 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 NARSO43776 548 aaKnown RBP11.84□□□□□ -0.51
APEX1-220ENST00000557592 MYBL1P10243 752 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 KRT3P12035 628 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 TCF3P15923 654 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 GDI1P31150 447 aa11.84□□□□□ -0.51
APEX1-220ENST00000557592 NOS2P35228 1153 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms