RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SLC12A8A0AV02 714 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 SYCE3A1L190 88 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 OTOL1A6NHN0 477 aaPredicted RBP14.46□□□□□ -0.09
VPS33B-206ENST00000557358 SHISA7A6NL88 538 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 BECN2A8MW95 431 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 TULP2O00295 520 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 SCAMP3O14828 347 aaKnown RBP14.46□□□□□ -0.09
VPS33B-206ENST00000557358 HMBSP08397 361 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 MRE11P49959 708 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 TPM4P67936 248 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 TYRO3Q06418 890 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 MIIPQ5JXC2 388 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 LY6G5CQ5SRR4 150 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 FSTL4Q6MZW2 842 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 PMF1Q6P1K2 205 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 GJB7Q6PEY0 223 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 MSANTD4Q8NCY6 345 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 FAM149B1Q96BN6 582 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 PLD4Q96BZ4 506 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 CHFRQ96EP1 664 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 ANP32EQ9BTT0 268 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 LSM14BQ9BX40 385 aaKnown RBP14.46□□□□□ -0.09
VPS33B-206ENST00000557358 SYNCQ9H7C4 482 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 FANCLQ9NW38 375 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 DEC1Q9P2X7 70 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 RAB23Q9ULC3 237 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 HBS1LQ9Y450 684 aaKnown RBP14.46□□□□□ -0.09
VPS33B-206ENST00000557358 ATG2BQ96BY7 2078 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 MYOFQ9NZM1 2061 aa14.46□□□□□ -0.09
VPS33B-206ENST00000557358 PIEZO1Q92508 2521 aa14.46□□□□□ -0.1
VPS33B-206ENST00000557358 PROB1E7EW31 1015 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 CAPN9O14815 690 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 MDM4O15151 490 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 HOXC11O43248 304 aaPredicted RBP14.45□□□□□ -0.1
VPS33B-206ENST00000557358 RNF40O75150 1001 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 STC2O76061 302 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 EGFP01133 1207 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 LTFP02788 710 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 PGFP49763 221 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 DAOAP59103 153 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 ZNF445P59923 1031 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 KRT31Q15323 416 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 E2F5Q15329 346 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 KLHDC7AQ5VTJ3 777 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 CDKAL1Q5VV42 579 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 RHBDF2Q6PJF5 856 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 ALYREFQ86V81 257 aaKnown RBP14.45□□□□□ -0.1
VPS33B-206ENST00000557358 IPO4Q8TEX9 1081 aaKnown RBP14.45□□□□□ -0.1
VPS33B-206ENST00000557358 BBS2Q9BXC9 721 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 MIS12Q9H081 205 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 ARHGEF4Q9NR80 690 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 COL4A3Q01955 1670 aa14.45□□□□□ -0.1
VPS33B-206ENST00000557358 TBC1D3BA6NDS4 549 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 YJEFN3A6XGL0 299 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 E7ENQ6 273 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 ZBTB24O43167 697 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 GFRA3O60609 400 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 PAPSS2O95340 614 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 LMNAP02545 664 aaKnown RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 UCHL3P15374 230 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 CORO1AP31146 461 aaKnown RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 GRIA2P42262 883 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 GPD2P43304 727 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 DRAP1Q14919 205 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 HSF5Q4G112 596 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 FILIP1LQ4L180 1135 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 DENND1BQ6P3S1 775 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 Q6ZS52 159 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 TPGS1Q6ZTW0 290 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 C11orf57Q6ZUT1 292 aaPredicted RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 TRMT11Q7Z4G4 463 aaKnown RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 FMNL3Q8IVF7 1028 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 UNC45BQ8IWX7 931 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 EDEM1Q92611 657 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 SPAG5Q96R06 1193 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
VPS33B-206ENST00000557358 PLCB1Q9NQ66 1216 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 PCDHGC3Q9UN70 934 aa14.44□□□□□ -0.1
VPS33B-206ENST00000557358 CHURC1-FNTBB4DL54 471 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 NEDD8-MDP1E9PL57 170 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 FOXN3O00409 490 aaPredicted RBP14.43□□□□□ -0.1
VPS33B-206ENST00000557358 PIK3R2O00459 728 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 KAT7O95251 611 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 NCAM1P13591 858 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 CNR2P34972 360 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 OPRD1P41143 372 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 TNFRSF4P43489 277 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 SLC11A2P49281 568 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 MRPS21P82921 87 aaKnown RBP14.43□□□□□ -0.1
VPS33B-206ENST00000557358 SATB1Q01826 763 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 UBXN1Q04323 297 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 ANO6Q4KMQ2 910 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 NUGGCQ68CJ6 796 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 GRAMD4Q6IC98 578 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 FAM71AQ8IYT1 594 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 AOPEPQ8N6M6 819 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 NEK11Q8NG66 645 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 RPLP0P6Q8NHW5 317 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms